Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00843 ATGGAATTGCATTGCTCCGTGAAGAAAATGGAAAATGAGAAAGCGTTTGAGTTTCTCGGATGCGTTCCTCTTCTGCAGAGGCTTCCGAGCTCGTCTGTGAGGAAGATAGCTCAACTTGTTGATGTCAAATACTGTGAGCCAGGAGAGTATGTTGTTCGCGAGGGTGAACCTGGAGATGGCGTGTACTTCATATTGGATGGAAAGGCCGAGGTTCTTGGATCTGTTAGTGCCAATGATGAAAATCGCCCAGAGTTCCAATTGAAACGATTTGACTACTTTGGTTATGGTTTGTCAAACACAGTTCACCAGGCAGATGTTGTTGCTTTGTCTAAGCTGACATGCTTAGTGCTTCCCCATGAGCACTCAACACTGCTGCAGCCAAAGTCTATCTGGAGAGCAGAAAATTCTCTTGAGACATGCTCACCTGTGGAGAATATATTGCATTTGGAGCCCATAGAGGTAGATATCTTCCAAGGAATTACCCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGGCAGATGATTGGACAGGCACTGGCTGCAGCTTCAAAATCTGTTGACTCTCTTAAGGTTGTTCATAGTTTGCATGCCTATTTTATTCTTGCGGGGGATTTAAACATGCCAATTACATATCAAGTTCACCGTATCCGTAATGGGAAGAGCTTTGCTTCAAGGAAAGTGGATGGAATTCAAAAGGGAAATGTCATATTCACTCTGCTGGCTTCATTTCAAAAAGAAGAATCAGGGATGGTCCACCAAGAAGTAGCTATACCATCTGTCCCGGCTCCAGATAAGCTTTTGCCAATGGAAGAGCTACGGGAGAGACGTCTTACTGACCCTCGTTTACCAATAACCTATCGGAACAAAGTAGCTACATCTCAATTCATCCCCTGGCCCATAGAGATACGGTTATGTGAATATGAAACTTCAACAAATATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTAGAGCAAAGGGAAAACTTTCAGATGATCAAGCCTTGCATAGGTGTGTGGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCCCACCGTGAGAAGGGTTTCAGGACACGTTCTGTTAGTCTGGACCACTCCATGTGGTTTCACCGATCCGTAAGAGCTGACGACTGGGTGCTATTTGCGATCTTTACTCCTAGTGCCCATAGTGCACGTGTCTTTGTCACCGGCCAAATGTTCAATCAGAAGGGAGAGCTTCTTGTGTCATTGGTTCAAGAAGGACTAGCTAGGAAAATTAATCCCGGAAATTCAGCCATTAAATCTAAGTTGTGA 1317 0.4412 MELHCSVKKMENEKAFEFLGCVPLLQRLPSSSVRKIAQLVDVKYCEPGEYVVREGEPGDGVYFILDGKAEVLGSVSANDENRPEFQLKRFDYFGYGLSNTVHQADVVALSKLTCLVLPHEHSTLLQPKSIWRAENSLETCSPVENILHLEPIEVDIFQGITLPDAPRFGKVFGGQMIGQALAAASKSVDSLKVVHSLHAYFILAGDLNMPITYQVHRIRNGKSFASRKVDGIQKGNVIFTLLASFQKEESGMVHQEVAIPSVPAPDKLLPMEELRERRLTDPRLPITYRNKVATSQFIPWPIEIRLCEYETSTNMTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHREKGFRTRSVSLDHSMWFHRSVRADDWVLFAIFTPSAHSARVFVTGQMFNQKGELLVSLVQEGLARKINPGNSAIKSKL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00843 438 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 51 67 IPR018488 -
Pumo7g00843 438 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 426 IPR029069 -
Pumo7g00843 438 FunFam Acyl-CoA thioesterase II 10 133 - -
Pumo7g00843 438 SUPERFAMILY cAMP-binding domain-like 15 121 IPR018490 -
Pumo7g00843 438 CDD Thioesterase_II_repeat2 155 247 - -
Pumo7g00843 438 SMART cnmp_10 24 141 IPR000595 -
Pumo7g00843 438 PANTHER ACYL-COA THIOESTERASE 121 426 IPR003703 GO:0006637|GO:0047617
Pumo7g00843 438 Pfam Thioesterase-like superfamily 170 423 - -
Pumo7g00843 438 Gene3D - 138 427 IPR042171 -
Pumo7g00843 438 CDD Thioesterase_II_repeat1 322 423 - -
Pumo7g00843 438 FunFam Acyl-CoA thioesterase II 138 428 - -
Pumo7g00843 438 NCBIfam acyl-CoA thioesterase II 147 425 IPR003703 GO:0006637|GO:0047617
Pumo7g00843 438 Pfam Cyclic nucleotide-binding domain 44 120 IPR000595 -
Pumo7g00843 438 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 139 251 IPR029069 -
Pumo7g00843 438 ProSiteProfiles cAMP/cGMP binding motif profile. 24 94 IPR000595 -
Pumo7g00843 438 Gene3D Jelly Rolls 3 131 IPR014710 -
Pumo7g00843 438 CDD CAP_ED 24 121 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00843 Pumo-Chr7 14907649 14916518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00843 10 438 Acyl Lipid Metabolism Gene Families AT1G01710 64.802 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00843 K01068 - gmx:100797680 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00843 7 14907649 14916518 Pumo7g00843 7 14907649 14916518 ECH
Pumo5g00282 5 6370038 6376815 Pumo7g00843 7 14907649 14916518 PCT