Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00816 ATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACAAGTCAGTCCTGCCATGTTGAGCTTAATTCTCGATTATTGTCGTTTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGTAAATCTTATGATGAGAAATTCGTTAGGATAGACACAGAGAAGCTTTGTGAGTTGACATCTGCTGCAGACAGCCTACAGCTAAAACCTTTGGTTGACCTTACCAGTCGTGCACTTGCTCGAATAATTGAAGGGAAAACACCAGAGGAGATACGCGATATATTTCATTTGCCTGATGATCTTACAGAGGTGTCTGAAAAGTTGGAGCCCTCGAGAAATATAACTGCCGACCCAAGGATCAGACTTTTGAACCGTTTGTATGCCAAAAAGAGAAAAGAACTAAAAGAGCGCGAAAGGTTAAAGAATGTTGAAGTTGAAGAAGAGCATGTGGATGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCAAAGGGAGTTAAAACTTCAAAGAATAAAAAGAAGAACCGGAGGAAAAAAGAGCAACAGAAGAACTCTTCTTTCAAGGAGGCATCTGAACTGAACAAAAAGGAGGTAAATGGTCATGATATCAGACATCAAAGTTCTGAAGCTGAGAGAATTAGCGAGACCTCATATTTACCCTATGCAGAAGATGACGCATTTTCTCCTAAGGTTGAGTTTGATGATGGTGATATAGATGATGAGATTGATCCTGCTTTAAAGGAAAAAATTGACAGGGAAGTGGAAGATTTTGCCCTCAGATTAAATTCTGACTGGCCAGAAAGAATGCAAGAACTTCTATCTTCGGGGCAAGAACGGAAGACGATGCTTTTTTCTACAGATGGTTTTCTAAGGCGTCATGCTTGA 900 0.4011 MGSSKNCAICLPQQVSPAMLSLILDYCRFHQVPGRSNKERKSYDEKFVRIDTEKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIFHLPDDLTEVSEKLEPSRNITADPRIRLLNRLYAKKRKELKERERLKNVEVEEEHVDERSVDDLLSFINGNDGDPKGVKTSKNKKKNRRKKEQQKNSSFKEASELNKKEVNGHDIRHQSSEAERISETSYLPYAEDDAFSPKVEFDDGDIDDEIDPALKEKIDREVEDFALRLNSDWPERMQELLSSGQERKTMLFSTDGFLRRHA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00816 299 Gene3D Potassium Channel Kv1.1; Chain A 2 113 IPR011333 -
Pumo7g00816 299 Pfam Skp1 family, dimerisation domain 68 102 IPR016072 GO:0006511
Pumo7g00816 299 MobiDBLite consensus disorder prediction 187 216 - -
Pumo7g00816 299 SMART skp1_3 3 67 IPR001232 GO:0006511
Pumo7g00816 299 SUPERFAMILY Skp1 dimerisation domain-like 38 101 IPR036296 GO:0006511
Pumo7g00816 299 Coils Coil 122 142 - -
Pumo7g00816 299 PANTHER SKP1 5 106 IPR016897 GO:0006511
Pumo7g00816 299 MobiDBLite consensus disorder prediction 158 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00816 Pumo-Chr7 14334780 14339881 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00816 - - gmx:100794666 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00816 7 14334780 14339881 Pumo7g00816 7 14334780 14339881 ECH
Pumo7g00816 7 14334780 14339881 Pumo5g00264 5 6107871 6118268 ECH
Pumo5g00264 5 6107871 6118268 Pumo7g00816 7 14334780 14339881 PCT