Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00682 ATGAAGATGTTGGAGAAAGTTGAAGAATTTAACATGGAGAGGGTGATTGAGGAATTTGAGAGGGTGACAAAGGATGCTGAGAGGATTCAAAGGGAAACCCTGCAAAGCATCTTGGAAGATAATGCTTCTGCTGAGTACTTGCTGAATTTGGGCTTGAATGGGAGGACTGACCCTGAGAGTTTCAAGGCCTTTGTTCCTCTGGTCACTCACAAAGATTTGGAGCCTTATATCAATAGAATACTTGATGGTGATACTTCTTCTGTTCTCACTGGCAAACCCATCACAACCATGTCTTTGAGTTCTGGCACTACTCAGGGAAAGCCAAAATTTGTACCATGGAATGATGAATTGTTTGACACCACATTGCATATATATCACACCTCTTTTGCCTTCAGGAACAGGGAATTTCCCATCAACAGTGGCAAGGCCTTGGGCTTTATCTACAGCAGCAAGCAGTTCAAAACCAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCGGGGTTCAGGCATACAATGAAGGCAATTCAGTCCCCATTTTGCAGCCCTGATGAAGTCATATTTGGTCCTGATTTTCACCAATCCTTGTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGAAGAAGTTAAGTTGGTGTCTTCCACATTTGCACACAGCATTGTCTATGCTTTTAGGACCTTTGAGCAAGTTTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGGGTCCTTAACAGCAAGATCACAGTTCCCTCCATTAGGACAGCTATGTCTAAGATCCTCAAACCTGACCCTGAACTGGCCAACTTGATCCACAACAAGTGCATGGGTCTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTCATGGGATCATGACTGGGTCAATGGAACCTTATTTGAAAAAGCTGAGGCATTATGTTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACAAATGTGAAACCAACAGTGCCACCTGAATTGGCCACCTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGATCTGGAGGGAACTAAGGGAGATGCTAGTTTCCTTTGTATGGATCCTAAGCCTGTGGGCCTCACTGAGGTGAAAGTTGGTGAGGAATATGAGATTGTCATCACCAATCCAGCAGGCTTGTACCGGTACAGGCTTGGCGATGTGGTCAAGGTTATGGGGTTCCATAACTCAGCTCCAGAAATCAAGTTTGTTCGCCGTAGCAATCTTCTGCTTACCATCAACATTGACAAGAACACAGAGAAAGATTTGCAGTTGGCTGTGGAAGCAGCATCACAATTGTTGGCAGAGGAGAAATTGGAAGTTGTTGACTACACTAGCCACATAGATTTGTCCAAAGAGCCAGGACACTATGTTATCTTCTGGGAGATCAGTGGTGAAGCAAGTGAAGAAGTGCTCGGTGGATGCTGCAACTGTTTGGACAAGTCCTTTGTAGATGCTGGCTACACCAGTTCGCGCAAAGTCAAGTGCATCGGGGCCCTCGAACTCCGAGTTGTTAGGAGAGGAACATTCCAGAAGATACTTGAGCATTCCCTGGCACTAGGAGCTGCTGTGTGCCAGTTCAAGACACCAAGATGTGTAGGCCCTACAAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAGCTATCTCAGTACTGCCTTCAATTGA 1755 0.4541 MKMLEKVEEFNMERVIEEFERVTKDAERIQRETLQSILEDNASAEYLLNLGLNGRTDPESFKAFVPLVTHKDLEPYINRILDGDTSSVLTGKPITTMSLSSGTTQGKPKFVPWNDELFDTTLHIYHTSFAFRNREFPINSGKALGFIYSSKQFKTKGGVLAGTATTNVFRNPGFRHTMKAIQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVKLVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKITVPSIRTAMSKILKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVHGIMTGSMEPYLKKLRHYVGELPLLTSDYGSSEGWIGTNVKPTVPPELATYTVLPQIGYFEFIPLRDLEGTKGDASFLCMDPKPVGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSAPEIKFVRRSNLLLTINIDKNTEKDLQLAVEAASQLLAEEKLEVVDYTSHIDLSKEPGHYVIFWEISGEASEEVLGGCCNCLDKSFVDAGYTSSRKVKCIGALELRVVRRGTFQKILEHSLALGAAVCQFKTPRCVGPTNTKVLQILNENVVKSYLSTAFN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00682 584 Pfam GH3 auxin-responsive promoter 18 559 IPR004993 -
Pumo7g00682 584 Coils Coil 12 32 - -
Pumo7g00682 584 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 9 583 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00682 Pumo-Chr7 11320034 11324544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00682 19 581 EF-hand Containing Proteins AT1G23160 39.100 8.31e-138 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00682 K14506 - gmx:100813492 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00682 7 11320034 11324544 Pumo7g00682 7 11320034 11324544 ECH
Pumo5g03881 5 88873305 88874457 Pumo7g00682 7 11320034 11324544 PCT