Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03881 ATGTTAGAGAAAGTGGAGGAGTTTAACATGGACAAAGTTATAGAAGAGTTTGAGTCATTGACAAAGGATGCAGAAAGGGTTCAGAGGGAAACGCTGAAAAGGATTTTGGAGGATAACGCATCAGCAGAGTATTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCCGAGAGTTTCAAGGCCTGTGTTCCTCTGGTTACCCACAGAGAATTGGAACCTTATATCTACAGAATTATTGATGGTGATGCTTCTCCTATTCTAACTGGAAAACCCATCACAACCATGTCTTTAAGTTCTGGCACTACCCAGGGGAAGCCAAAATATGTACCTTGGAATGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGGGAGTTTCCTATAAAAAATGGGAAGGCTTTAAGCTTTATATACGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTGGCAGCTAGAACTGCTACAAGCAATGTGTTCCGTAATGCCGGTTACAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGCCCAGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCATTGTACTGCCATCTGTTGTGTGGTCTAATTTTCCGGGAGGAAGTTCAGTTTGTGTCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAGCAAGTGTGGGAAGAAGCTGTGTAA 720 0.4222 MLEKVEEFNMDKVIEEFESLTKDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHRELEPYIYRIIDGDASPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFRNAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEEAV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03881 239 Coils Coil 10 30 - -
Pumo5g03881 239 Pfam GH3 auxin-responsive promoter 16 237 IPR004993 -
Pumo5g03881 239 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 238 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03881 Pumo-Chr5 88873305 88874457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03881 17 237 EF-hand Containing Proteins AT1G23160 37.838 1.21e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03881 K14506 - gmx:100777944 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03881 5 88873305 88874457 Pumo7g00682 7 11320034 11324544 PCT