Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00668 ATGGGAGAACATGAGGGGTGGCAACAGCCATCAAGTGGGCTATTGCCAAATGGCTTGTTGCCCAATGAAGCTGCCTCTGTGATACAGGTTCTTGACTCGGAGCGGTGGTTGAAAGCTGAGCAAAGGACTGCTGAGCTGATTGCCTGCATTCAGCCTAATCCGCCCTCTGAGGAACGCCGGAATGCAGTTGCCGACTATGTCCAACGGCTGATCATGAAATGCTTCCCTTGCCAGGTGTTTACCTTTGGTTCGGTACCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGATACTTGGGCACATCAGGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCTGAAGTGAAAATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGCATTATCCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTCGGTGCCCACCATGGACTTATCTCAACTTATGCCTTAGAAACCTTGGTTCTTTACATTTTTCATGTTTTCAACAATTCTTTTGCTGGACCGCTCGAGGTATTGTATCGATTTTTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGCGTAAGTCTATGGGGTCCAGTACCTATTAATTCGCTCCCAGATGTGACAGCCGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAATTATTTCTTGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGCCAACCCTTTGTTTCCAAGCATTTCAATGTTATTGATCCTCTACGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGTAATTTCTTCAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGTTGGCTAGATTACTTGATTGCCCAGAGGATCAATTGTTTTCTGAGGTCAATCAGTTCTTTTTTAACACTTGGGATAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATTGACTTACGGCGTTTGAGTATATCCAGTCATGACCAATTACAGAAGTCTGAGAATCTTCGGAACAATAACCATAAAATTGATAATTCCTCCAATCATGAATCTAATGAAGGGGAACATGTTTCACAAAGTGGTCTATCTCAGTATAGTAATTTAGCATCGGAAAAGACATCTAGAAGTGTTGTTTCTACAGTGTCACATTCTCAGAATCAAAAGAGTTATGGAAGTCAAAATAATTCAAGGACCTTGGATCAAGTCCGAAGGGAAACTAATTCTAATCAAGGTGCTCATGTTGTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACCTAG 1479 0.4185 MGEHEGWQQPSSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPINSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEDQLFSEVNQFFFNTWDRHGSGERPDVPSIDLRRLSISSHDQLQKSENLRNNNHKIDNSSNHESNEGEHVSQSGLSQYSNLASEKTSRSVVSTVSHSQNQKSYGSQNNSRTLDQVRRETNSNQGAHVVIKVREMLKLIT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00668 492 Gene3D - 162 365 - -
Pumo7g00668 492 MobiDBLite consensus disorder prediction 418 473 - -
Pumo7g00668 492 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Pumo7g00668 492 MobiDBLite consensus disorder prediction 400 417 - -
Pumo7g00668 492 MobiDBLite consensus disorder prediction 394 473 - -
Pumo7g00668 492 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 462 - -
Pumo7g00668 492 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Pumo7g00668 492 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Pumo7g00668 492 CDD NT_PAP_TUTase 59 166 - -
Pumo7g00668 492 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Pumo7g00668 492 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Pumo7g00668 492 Pfam Nucleotidyltransferase domain 78 145 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00668 Pumo-Chr7 11067416 11071333 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00668 - - gmx:100800527 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00668 7 11067416 11071333 Pumo7g00668 7 11067416 11071333 ECH
Pumo5g03894 5 89028787 89036679 Pumo7g00668 7 11067416 11071333 PCT