Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03894 ATGGGCGAGCATGAGGGGTGGGCACAGCCACCAAGTGGGATATTGCCAAATGGCTTGCTGCCCAATGAGGCCGCATTAGTGATGCGAGTGCTCGACTTGGAGCGATGGTTAAAGGCTGAGGAGAGGACTGCAGAGCTAATTGCCTGCATTCAGCCTAATCCATCCTCCGAGGAGCGTCGCCATGCGGTTGCAGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACTTATTTACCTGATGGAGATATTGACTTGACAGCATTCAGTAAGAATCAAAATCTGAAGGATGCTTGGGCACATCAGGTTCGTGACATGCTCGAGAATGAGGAAAAGGATGAAAATGCAGAGTTTCGTGTCAAAGAGGTTCAGTACATCCAGGCTGAAGTGAAAATTATAAAGTGTCTTGTTGAGAATATTGTGGTAGACATTTCATTTAATCAGCTTGGAGGATTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATTTGATTAACCAAAACCATTTATTCAAGCGTAGCATTATACTTATAAAAGCCTGGTGTTACTATGAGAGTCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCTCTTGAGGTATTGTATAGATTTTTGGAGTTTTTTAGTAAGTTTGATTGGGATAATTTCTGTGTAAGCCTATGGGGTCCTGTACCCATTAGTTCACTCCCAGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTTGATGCCTGCAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCATTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAGCAATAACCTTGGGCGAAGTGTCAGCAAAGGAAATTTCTTTAGAATACGAAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCTAGACTGCTTGATTGCCCAAAGGAGGAATTGTTTTTGGAAGTCAATCAGTTCTTTATGAACACCTTGGTCAGGCATGGAACTGGGCAGCGACCTGATGCTCCAAGCAATGACTTATGGCGTTTGAGGTTATCTAGTAATGACCAATTACAGGGGTTTGAGAATCTCTGGAAAAATAGCCAAAAAATTAATAATACCTATAATCATGAATTTCAAGTGAAAGAGGTGCATGCTTCACAAAGTGTTCTATCACAGAACAGTATTTTGTTCTCCGAAAGCATATCTAAGAGTAGTGATGTTTCTACACTATCACATTCTTATGCTAACCAAAATAATGCAAGGAATTTTGATCAGGTCAAAAGGGAAGCTAATTGTAATCAAGGTGTTCGTGTTGATAAAGAACAGAGAAATGTTAAACCAAATAACCCATTCAATGATGTTCCAGGAAGGCTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCATATGGTGAAGTTCCTACCCAAGCAAGACATACAAGAGCCCCAGAAAGTGGGAAAGGCCCAACTTCCTCTGCAAAGTTGGAGAATAGTTGTCACAGGAAGCATCTTGATTCTGACATGCCTGCTAGTTATGGTATTAGAATTGACGATTCATCTGCTAGGCACATCACATCTCGTCAAGTTCTTGATAGTCCTGCTGATTCAATCAATGGCTCAAATAGTTATGATGGTGAATCAGGCCCGGGCATCATGGGTGAAGATTTTGCATCTGTTGCTGGAGTAGTTGGAACACATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCTCCCACAACTCAAGGTTTCACTGGTCAGGCTCACATTCCAGTGAATTTAGCCCCAGGTCACCTACCACTTCCATTTTCACCTTCCATTCTTGCATCAATGGGATATGCTCAGAGAAACATGGGTAACATGCCCTTGATTGAGGCTCATTGGGGTACTAATATGCAATTTCCCCAAGGTTTAGTCCCTTCACCATTGACTCCATATTTCCCTGGCATAGGATTGACCTCAAATCCTGAAGATTTAATTGAAACTGGTAATGAGAATTTCAATTCTGTTGAAACGAGTCTAGCAGAAGCTGATAATGATTTCTGGCATGAGCAAGAAAGGGCTTCTTCTAGGGGGGTTGAAGTTGATAATGGAAATTTTGATATGCTTCCAGATGATAAGCGACAGTCAACTTCAGGTGGTTATAACTCTATCCCATCATCTCATGTTGGCAGCTCTAGTAATTCTTCTAGACTTCAGCAGACGTTTACTAAAGAAAACAGAGGTTCTACAAGAGAAGAGCACATTGATAGTCCTCAATATCAAGATGGCAGAGGAAATGGCGCTTATTTTGATGATAGAATAGCAAATCCTAGGTTGCCCAGTGCACCACCTTCAAGCTCCTTCAGGAATAAGACGTCTTTTGAAAGCTCTTGGGAGGGATCTTCAGCAAAGTCTTCAAAATTAACTAGGGAAAAAAGAGGGAAGAAAAATACTTCCTCAGTGTCATCTGCTGCTTACGGAAAGGGCAAGAATGCCTCAGATATTTCATCTAATCTAGTGGGTGATGAAAACAGACAATGGCCTGCTTTCTCAACTACAGCATCTGATATGTCAGAAAGAAGCACTGGGCCACTGGCTGTTGCTCCCGTGCATGTTCCAAGACAGCTAGTATCTGGTTTTGAAGTGGCTCGGACAAGTGGATCAGATTCTGTGTTACCCATGGCACCGGTGCTTATGGGTCATGGTTCTCGCCAAAGAACAGTTGATAATTCTGGGGTTGTTCCCATGGCATTCTATCCCACAGGGCCACCAGTACCATTTGTTACTATGCTTCCATTTTATAATTTTCCTACTGAATCTTCTGACACATCAGCAAACAATTTCAGTGTAGAAGAAGATGCAGATAACAGTGGTCATGGTCAGAATTTTGATCCATCTGAGGTGTATGACCAGCCTGAGGTGTTGAGCTCTTCCTGTTCTATGAGAAGAGCTGCTATTGACTCATCAGAGCCTAAACCTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAGTATGGGCGATTTTGTCAAAATTCACGCCATCCTCATTCGGTTATCTATCCTTCATCGGTTATGGTACCTCCTGTTTATTTGCAGGGTCGTTTTCCTTGGGATGGTCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTATGAACTATGGGCCACAACTAGTACCTGTTGCTCCTCTCCATTCAGTTTCTAACAGACCAGCCAATATTTACCAACGTTTCATAGATGAGATACCACGGTATCGAAGTGGGACAGGAACCTACCTGCCAAATCCTAAGGTTTCTGTTCGGGATCGACATTCTACAAGTACCAGAAGGGGTAATCACAACTATGACAGAAGTGACCAGCATGGTGACAGAGAAGGGAATTTGAATAGTAACTCAAAGTTGCGAACAAGTGGGCGTAGCCATAACCGCAGTCAAACTGAGAAGTCTAGCTCAAGGCCAGAAAAGTTGGCAACAAGTGAGAGCCATGCTGAAAGACCGTGGGGTTCACATAGACATGACTCTTTTGTTTCTCACCAGAATCAGAATGGTCCTGTCCGGTTAAATTCCTCACAGAACAGTCCAGCAAATGTGGCTTATGGAATGTACCCTCTACCAGGCATGCGCTCCAGTGGGATCTCATCAAATGGAGCAACAATTCCACCTGTTGTAATGGTGTATCCTTATGATCATAATGCTAGCTACAGTTCACCAGCAGAACCACTCGAATTTGGAACTCTGGGACCTATGGGTTTCCCAGGTGTCAACGAAGTATCACAGCTGAATGAGGGAAGCCAATCTGGTGGAGCATTTGAGGAGCAAAGGTTTAATGGTGGCACTGCTCAACAATCCTCACCAGATCAACCCTCTTCACCCAAGGTCCCGAGGGGGCTTTGA 4032 0.4325 MGEHEGWAQPPSGILPNGLLPNEAALVMRVLDLERWLKAEERTAELIACIQPNPSSEERRHAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDAWAHQVRDMLENEEKDENAEFRVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVSNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPKEELFLEVNQFFMNTLVRHGTGQRPDAPSNDLWRLRLSSNDQLQGFENLWKNSQKINNTYNHEFQVKEVHASQSVLSQNSILFSESISKSSDVSTLSHSYANQNNARNFDQVKREANCNQGVRVDKEQRNVKPNNPFNDVPGRLLFARTCSSPELTDSYGEVPTQARHTRAPESGKGPTSSAKLENSCHRKHLDSDMPASYGIRIDDSSARHITSRQVLDSPADSINGSNSYDGESGPGIMGEDFASVAGVVGTHMMHQEEQDLLNMMTSPTTQGFTGQAHIPVNLAPGHLPLPFSPSILASMGYAQRNMGNMPLIEAHWGTNMQFPQGLVPSPLTPYFPGIGLTSNPEDLIETGNENFNSVETSLAEADNDFWHEQERASSRGVEVDNGNFDMLPDDKRQSTSGGYNSIPSSHVGSSSNSSRLQQTFTKENRGSTREEHIDSPQYQDGRGNGAYFDDRIANPRLPSAPPSSSFRNKTSFESSWEGSSAKSSKLTREKRGKKNTSSVSSAAYGKGKNASDISSNLVGDENRQWPAFSTTASDMSERSTGPLAVAPVHVPRQLVSGFEVARTSGSDSVLPMAPVLMGHGSRQRTVDNSGVVPMAFYPTGPPVPFVTMLPFYNFPTESSDTSANNFSVEEDADNSGHGQNFDPSEVYDQPEVLSSSCSMRRAAIDSSEPKPDILNGDFVSHWQNLQYGRFCQNSRHPHSVIYPSSVMVPPVYLQGRFPWDGPGRPQSANVNLFTQLMNYGPQLVPVAPLHSVSNRPANIYQRFIDEIPRYRSGTGTYLPNPKVSVRDRHSTSTRRGNHNYDRSDQHGDREGNLNSNSKLRTSGRSHNRSQTEKSSSRPEKLATSESHAERPWGSHRHDSFVSHQNQNGPVRLNSSQNSPANVAYGMYPLPGMRSSGISSNGATIPPVVMVYPYDHNASYSSPAEPLEFGTLGPMGFPGVNEVSQLNEGSQSGGAFEEQRFNGGTAQQSSPDQPSSPKVPRGL 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 731 879 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1303 1336 - -
Pumo5g03894 1343 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Pumo5g03894 1343 SUPERFAMILY Nucleotidyltransferase 31 201 IPR043519 -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1132 1240 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1148 1174 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 509 539 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 981 1007 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1186 1218 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 819 843 - -
Pumo5g03894 1343 Gene3D - 162 358 - -
Pumo5g03894 1343 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1219 1240 - -
Pumo5g03894 1343 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 1339 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 857 879 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 749 784 - -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 981 1003 - -
Pumo5g03894 1343 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Pumo5g03894 1343 CDD NT_PAP_TUTase 59 166 - -
Pumo5g03894 1343 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Pumo5g03894 1343 MobiDBLite consensus disorder prediction 1300 1343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03894 Pumo-Chr5 89028787 89036679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03894 - - gmx:100809742 2042.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03894 5 89028787 89036679 Pumo7g00668 7 11067416 11071333 PCT