Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00645 ATGGAAGAGAAACTAAAGTACCTCTTTCTCTCTTCCTTCTTAACCCTCTTCCTCTGCATCTCCGCCACTTCCCAAACCCAAACCCTACTCCTCCGCACCCTCCCCCACGCCCCCACACTCACATGGCCCGAATCAACAACCTCAGGGTCCGACCCGGAACCCGACCCGTTCTCCCTCTCCGTTCACCTCCACCACATTGACGCACTCTCCCTCAACAAAACCCCCTCCCAACTCTTCCACCTAAGACTCCAACGCGACGCCGCAAGGGTCAAAACCCTCACTTCCCTTTCAGCCCCGAACCAAACCCGACCCGCCACCAAATCCGGGTTGGGTTTCAGCAGCTCCGTGATCTCGGGTCTTTCACAAGGCAGCGGCGAGTACTTCACGCGCTTAGGCGTCGGAACCCCTCCGAAGTACCTCTACATGGTCCTGGACACCGGAAGCGACGTCGTTTGGCTCCAGTGCAAGCCCTGCGCCAAATGCTACTCCCAAACCGACCAAATCTTCGACCCCACAAAATCCAAATCCTTCGCCGGAGTCCCCTGCGCCTCCCCCCTCTGCCGCCGCCTCGACTCCCCCGGCTGCACCACAAAAAACAACCTTTGCCAGTACCAGGTTTCTTACGGCGACGGTTCTTTCACTTTCGGCGATTTCTCAACCGAAACGCTCACGTTCCGACGCGCGCAGGTCCCGCGCGTGGCCCTCGGCTGCGGCCACGACAACGAGGGACTCTTCGTGGGCGCCGCGGGTTTGTTGGGCCTCGGTAGCGGCGGGTTGTCGTTTCCCAGCCAAGCCGGAACCCGGTTCAATAACAAATTCTCTTACTGTTTAACGGACCGAACCGCTTCCGCTAAACCGTCTTCGGTTGTGTTCGGCGACTCGGCCGTTTCGCGAACCGCCCGGTTCACTCCCTTAGTTAAAAACCCTAAGCTCGACACTTTTTATTATGTTGAGTTACTCGGGATCAGCGTTGGTGGCACGCCGGTTCGGGGAATTTCGGCTTCGCTCTTTCGGCTCGACTCGACCGGGAATGGTGGCGTGATTATTGACTCGGGGACTTCCGTCACGCGCCTCACGCGCCCTGCTTACGTGGCTCTCAGAGACACGTTTCGGGTCGGGGCTTCGCACTTGAAGCGTGCGCCGGAGTTTTCGCTTTTCGACACGTGTTTTGATCTTTCGGGGCTGTCGGAGGTTAAGGTTCCGACCGTGGTGTTGCATTTCCGGGGTGCTGACGTGTCCTTGCCGGCGTCGAATTATCTCATTCCGGTGGATAACAACGGGAGCTTTTGCTTTGCGTTCGCCGGAACGATGAGTGGGTTGTCTATTATTGGGAATATTCAGCAGCAAGGGTTTCGGGTTGTTTTTGATTTGGCGGGTTCTCGGGTCGGGTTTGCCCCGAGAGGGTGCGCGTGA 1413 0.5789 MEEKLKYLFLSSFLTLFLCISATSQTQTLLLRTLPHAPTLTWPESTTSGSDPEPDPFSLSVHLHHIDALSLNKTPSQLFHLRLQRDAARVKTLTSLSAPNQTRPATKSGLGFSSSVISGLSQGSGEYFTRLGVGTPPKYLYMVLDTGSDVVWLQCKPCAKCYSQTDQIFDPTKSKSFAGVPCASPLCRRLDSPGCTTKNNLCQYQVSYGDGSFTFGDFSTETLTFRRAQVPRVALGCGHDNEGLFVGAAGLLGLGSGGLSFPSQAGTRFNNKFSYCLTDRTASAKPSSVVFGDSAVSRTARFTPLVKNPKLDTFYYVELLGISVGGTPVRGISASLFRLDSTGNGGVIIDSGTSVTRLTRPAYVALRDTFRVGASHLKRAPEFSLFDTCFDLSGLSEVKVPTVVLHFRGADVSLPASNYLIPVDNNGSFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFAPRGCA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00645 470 Pfam Xylanase inhibitor C-terminal 315 465 IPR032799 -
Pumo7g00645 470 Gene3D Acid Proteases 291 470 IPR021109 -
Pumo7g00645 470 PANTHER ASPARTYL PROTEASES 28 463 IPR001461 GO:0004190|GO:0006508
Pumo7g00645 470 Pfam Xylanase inhibitor N-terminal 127 293 IPR032861 -
Pumo7g00645 470 Gene3D Acid Proteases 110 290 IPR021109 -
Pumo7g00645 470 SUPERFAMILY Acid proteases 121 469 IPR021109 -
Pumo7g00645 470 ProSiteProfiles Peptidase family A1 domain profile. 127 465 IPR033121 -
Pumo7g00645 470 FunFam Aspartyl protease family protein 2 293 469 - -
Pumo7g00645 470 PRINTS Pepsin (A1) aspartic protease family signature 441 456 IPR001461 GO:0004190|GO:0006508
Pumo7g00645 470 PRINTS Pepsin (A1) aspartic protease family signature 347 358 IPR001461 GO:0004190|GO:0006508
Pumo7g00645 470 PRINTS Pepsin (A1) aspartic protease family signature 133 153 IPR001461 GO:0004190|GO:0006508
Pumo7g00645 470 FunFam aspartyl protease family protein 2 104 291 - -
Pumo7g00645 470 CDD cnd41_like 126 469 IPR033873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00645 Pumo-Chr7 10602771 10604451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00645 117 469 Miscellaneous Gene Families AT1G77480 27.720 9.48e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00645 K22683 - gmx:100808163 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00645 7 10602771 10604451 Pumo7g00645 7 10602771 10604451 ECH
Pumo5g03912 5 89175024 89176774 Pumo7g00645 7 10602771 10604451 PCT