Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03912 ATGGAAGGGGAGAAAATAACGAAATATGGCCTTCTCTTCCTATCCCTGGCCATAACCCTCTCTCTCTCCGCCGCTACCCAAACCCAAACCTTAACCTTGCCCCTCCACTCCCTCCCTCAACCCCCCACCCTCTCATGGCCCCTCTCCGAATCCGACTCGGAAGAAGAAGCTCTCTCACTTCACCTCCACCACATAGACGCCCTCTCCTCCAACAAAACCCCGGAGCAGCTCTTCCACCTCAGGCTCCAACGCGATGCCAAAAGAGTCGAAGCCGTACTTACCCTCGCAGCTCTCAACCAAAGCCACGCGCGCAGATCCGGCTCCGGCTCCAGTTTCAGCAGCTCCATCGTTTCGGGCCTAGCCCAAGGTAGCGGCGAGTACTTCACGCGCATAGGCGTCGGCACACCCGCTAGATACGTCTACATGGTCTTGGACACAGGAAGCGACGTCGTTTGGCTCCAATGCTCCCCTTGCCGCAAATGCTACACCGAAACCGACCCCGTTTTCGACCCCTCAAAGTCCAGAACCTACGCCGCAATCCCCTGTGGGGCCCCTCTCTGCCGCCGGTTAGACTCCCCCGGCTGCAACAAAAACAAGGTTTGCCAGTACCAGGTTTCCTACGGCGACGGTTCCTTCACATTCGGCGATTTCTCCACCGAAACGCTCACCTTTCGAAGAACAAGAGTCACGCGCGTCGCCCTCGGCTGCGGCCACGACAACGAGGGCCTCTTCATTGGCGCTGCTGGCCTTTTGGGCCTGGGCCGGGGAGGCTTATCGTTTCCGGTCCAGACCGGACGCCGCTTCAACCAGAAATTCTCTTACTGCCTCGTCGACCGTTCCGCTTCCGCCAAACCGTCTTCTATCGTCTTCGGAGATTCTGCTGTTTCTCGAACCGCGCGCTTCACTCCTCTGATCAAAAACCCTAAGCTCGACACCTTCTACTACGTCGAGCTCCTCGGGATCAGTGTCGGTGGAGCCCCGGTGCGCGGCCTCTCCGCCTCCCTCTTCCGCCTCGACGCCGCCGGGAACGGCGGCGTCATCATCGATTCGGGCACGTCCGTGACCCGACTCACCCGACCCGCCTACATTTCCCTCAGAGACGCTTTCCGCGTTGGAGCCTCGCGTCTGAAGCGCGCGCCGGAGTTCTCGCTCTTCGACACGTGTTTCGATCTGTCCGGTCTCACGGAGGTGAAGGTGCCGACGGTGGTGCTGCATTTCCGAGGTGCTGACGTGTCCTTGCCGGCTACGAATTACTTGATTCCGGTGGATAACAGTGGGAGCTTCTGCTTCGCGTTTGCGGGAACCATGAGCGGTTTGTCCATAATTGGTAACATCCAGCAACAAGGGTTCCGGGTCTCGTACGACCTTGCGGCTTCGCGGGTCGGGTTTGCCCCGAGAGGTTGTGTTTGA 1410 0.5936 MEGEKITKYGLLFLSLAITLSLSAATQTQTLTLPLHSLPQPPTLSWPLSESDSEEEALSLHLHHIDALSSNKTPEQLFHLRLQRDAKRVEAVLTLAALNQSHARRSGSGSSFSSSIVSGLAQGSGEYFTRIGVGTPARYVYMVLDTGSDVVWLQCSPCRKCYTETDPVFDPSKSRTYAAIPCGAPLCRRLDSPGCNKNKVCQYQVSYGDGSFTFGDFSTETLTFRRTRVTRVALGCGHDNEGLFIGAAGLLGLGRGGLSFPVQTGRRFNQKFSYCLVDRSASAKPSSIVFGDSAVSRTARFTPLIKNPKLDTFYYVELLGISVGGAPVRGLSASLFRLDAAGNGGVIIDSGTSVTRLTRPAYISLRDAFRVGASRLKRAPEFSLFDTCFDLSGLTEVKVPTVVLHFRGADVSLPATNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLAASRVGFAPRGCV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03912 469 SUPERFAMILY Acid proteases 119 468 IPR021109 -
Pumo5g03912 469 ProSiteProfiles Peptidase family A1 domain profile. 127 464 IPR033121 -
Pumo5g03912 469 CDD cnd41_like 126 468 IPR033873 -
Pumo5g03912 469 Gene3D Acid Proteases 290 469 IPR021109 -
Pumo5g03912 469 Gene3D Acid Proteases 103 289 IPR021109 -
Pumo5g03912 469 FunFam aspartyl protease family protein 2 104 290 - -
Pumo5g03912 469 Pfam Xylanase inhibitor C-terminal 314 464 IPR032799 -
Pumo5g03912 469 PANTHER ASPARTYL PROTEASES 16 462 IPR001461 GO:0004190|GO:0006508
Pumo5g03912 469 Pfam Xylanase inhibitor N-terminal 127 292 IPR032861 -
Pumo5g03912 469 FunFam Aspartyl protease family protein 2 292 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03912 Pumo-Chr5 89175024 89176774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03912 94 468 Miscellaneous Gene Families AT1G77480 27.184 2.76e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03912 K22683 - gmx:100794269 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03912 5 89175024 89176774 Pumo7g00645 7 10602771 10604451 PCT