Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00344 ATGGCTTCAGTTGGCGCAGTCAAATTCTACTTGTGCCTTGTTCTATGGCTCTGGAACTTTCTACCTCCTTGTCAAGGTAATAATCAGCACTGGCATGAAAATAGATACCCTTTTATCAGAAATGCAAGCTCATTCTCATCACCATCAATTTCAACAACCACCACCAATAATGCCTATGACTACATAATTGTGGGAGGTGGCACAGCAGGGTGTCCTTTAGCTGCAACCCTCTCTCAGAACTTCAGTGTTTTGGTGCTTGAAAGAGGGGGTGTCCCTTTCACCAACCCCAATGTTTCATTTCTAGAGAACTTCCACATTACCTTGGCAGACATTTCCCCAACTTCAGCTTCTCAATACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCAAGGGTCTTGGGAGGTGGAAGTTCCATCAATGCTGGCTTCTACACCAGAGCAGACCCAAGGTTTATAAAGAAGGTGGGGTGGGATGTCAAGCTAGTAAATCAGTCATATCCATGGGTTGAGAAGCAAATTGTTCACCGTCCAAAGTTTTCACATTATCAGAGAGCAGTGAGGGACAGTCTTCTAGACTCTGGTGTGTCACCCTTTAATGGCTTCACCTATGATCATCTCTATGGAACAAAGGTTGGTGGAACCATTTTCGACAGATTTGGCCGCCGCCACACGGCTGCTGAACTGCTTGCTTCAGGGAAGCGTGACAAACTTACTGTTTTGGTCTATGCCACTGTCCAAAAGATTGTGTTTGATACAAGAGGGAAGAGACCAAAAGCTATGGGGGTTATTTTCCAAGATGAACATGGGAAACAGCATGAGGCTATTCTGTCAAATGATAGGCATAGTGAAGTGATAATGTCTAGTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGGCCAAAAGCAGAACTCCAGAAGTTGAACATCCCAGTGGTCCATGACAACCACTTTGTTGGGAAAGGAATGGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTAATAGACCAGTTCATCAGTCACTCATAGAAACTGTTGGTATCACCAAGATGGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGTATCATGTCAGCTGAGATTGGGCAGCTGTCCACAATTCCTCCAAAGCAAAGATCACCAGAAGCTGTTCAAGAATTTGTCAAGAACAAGAAAGACATACCGGTTGAATTATTCAAGGGAGGTTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTAGGTGAGCTCAGGCTGATCAACACCAATGTGAATGACAACCCTGCTGTTACCTTCAACTACTTCAGTCATCCATATGATCTTCATCGCTGCGTCAAGGGGATCCGCTTGGCCATTAAGGTTGTCCAGTCAAAACACTTCACAAACTACACTTTGTGCGACAGGAAGACCGCAGAGAAACTTCTCAACCTCACTGTCAAGGCTAATGTCAACTTCATACCCAAGCATCCCAATGACACAAAGTCAATAGCGCAGTTCTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAGCCATGATTACAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTGATGAATCACCAGGAACAAATCCTCAAGCCACTGTCATGATGATGGGAAGGTACATGGGGCTGAAGATTTTGAGAGATAGGTTGGGGAAATTGGCTGGTATATAA 1773 0.4467 MASVGAVKFYLCLVLWLWNFLPPCQGNNQHWHENRYPFIRNASSFSSPSISTTTTNNAYDYIIVGGGTAGCPLAATLSQNFSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGSSINAGFYTRADPRFIKKVGWDVKLVNQSYPWVEKQIVHRPKFSHYQRAVRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGKRDKLTVLVYATVQKIVFDTRGKRPKAMGVIFQDEHGKQHEAILSNDRHSEVIMSSGAIGTPQLLMLSGIGPKAELQKLNIPVVHDNHFVGKGMVDNPMNTMFVPSNRPVHQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSPEAVQEFVKNKKDIPVELFKGGFILSKVANPWSVGELRLINTNVNDNPAVTFNYFSHPYDLHRCVKGIRLAIKVVQSKHFTNYTLCDRKTAEKLLNLTVKANVNFIPKHPNDTKSIAQFCKDTVITIWHYHGGCHVGKVVSHDYKVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00344 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Pumo7g00344 590 SUPERFAMILY FAD/NAD(P)-binding domain 50 582 IPR036188 -
Pumo7g00344 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Pumo7g00344 590 Gene3D - 176 522 - -
Pumo7g00344 590 PIRSF Alcohol_oxidase 39 589 IPR012132 GO:0050660
Pumo7g00344 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Pumo7g00344 590 Gene3D - 59 572 IPR036188 -
Pumo7g00344 590 PANTHER OSJNBA0019K04.7 PROTEIN 20 584 - -
Pumo7g00344 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00344 Pumo-Chr7 4495338 4502210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00344 59 583 Miscellaneous Gene Families AT5G51950 52.919 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00344 K15403 - gmx:100788704 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04157 4 82227592 82237004 Pumo7g00344 7 4495338 4502210 PCT