Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04157 ATGGCGTCCATTGGTGCAGTCAAATTCTTGCTGTACTTAGTTCTATTATGCCTCCTCAACTATCTACCTTTTTCTCAAGGTAAGCAGAACTGGAATGAAGGGTACCCATTTATCAAGAGAGCAAGCTCATTGGGGTCTTCACCCAAAAGTGGGTATGACTACATAATAGTGGGGGGTGGCACAGCAGGGTGTCCATTGGCTGCAACCCTGTCTCAGAAGTTCAAAGTTCTGTTGCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCCAATGTGTCATTTCTGCAGAACTTTCACATTACATTGGCGGACACTTCACCAACTTCGGCTTCTCAATACTTCATTTCAACAGACGGAGTCCTCAACGCAAGGGGAAGGGTTTTGGGTGGCGGTAGTTCCATTAACGCTGGCTTCTATACTAGAGCAAACCTAAGATTTATAAGGAAGGTGGGGTGGGATACGGAGCTAGTGAAGGAGTCATATCCTTGGGTTGAGAAGCAGATTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGATGGGCTTCTAGATGCTGGTGTGTCTCCTTACAATGGCTTCACCTATGATCATAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGATAGATTTGGCCGTCGCCACACTGCTGCTGAATTGCTTGCTTCTGCCAACCCTCACAAACTTACTGTTTTGATCCACGCCACTGTCCAAAAGATTGTTTTTGATACCACAGGAAAAAGACCAAAAGCTACAGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATAAGGCATTTCTGGGAACTGGCAGGCAGAGTGAGGTGATTGTGTCTAGTGGGGCAATTGGGACTCCTCAACTGCTATTGCTCAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCCAAGAGACCAGTTCAGCAGTCACTCATAGAAACTGTTGGCATTACCAATTTGGGTGTGTACATTGAGACTAGTTGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTCTCTTGTCAGCTGAGATTGGGCAGCTGTCCACAATTCCACCAAAGCAAAGATCACAAGAAGCTGTTAAAGCTTTTGTGAAGAGCAAGAAAGACATACCAATTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAGGTTGCCAATCCTTGGTCAACTGGTGAGCTCAAGTTGATAAACACCAACGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCAGCCACCCTTATGATCTTAAGCGCTGTGTGGAGGGTATTCGCTTGGCAATAAAGGTTGTCCAGTCAGAACATGTCACAAACTACACTATGTGTGACAGAGAAACCGCAGAGAAAATGCTTAACCTCAGTGTGAAGGCCAATATCAACCTCATTCCCAAGCATGCCAATGACACAAAGTCAGTAGAGCAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGGTGCCATGTGGGGAAGGTGGTTAACTCTGAGTATAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTTCTGAGTCACCAGGAACCAATCCTCAAGCTACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGGGACAGGTTGGGGAAATTGGCCGGTATTTAA 1752 0.4578 MASIGAVKFLLYLVLLCLLNYLPFSQGKQNWNEGYPFIKRASSLGSSPKSGYDYIIVGGGTAGCPLAATLSQKFKVLLLERGGVPFNNPNVSFLQNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGSSINAGFYTRANLRFIRKVGWDTELVKESYPWVEKQIVHRPKFSDWQRAVRDGLLDAGVSPYNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLIHATVQKIVFDTTGKRPKATGVIFKDENGKQHKAFLGTGRQSEVIVSSGAIGTPQLLLLSGIGPKAELQKLNIPVVLDNQFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSCGFGQSKDSIHCHHGLLSAEIGQLSTIPPKQRSQEAVKAFVKSKKDIPIEAFRGGFILSKVANPWSTGELKLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSEHVTNYTMCDRETAEKMLNLSVKANINLIPKHANDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEYKVLGVDRLRVVDGSTFSESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04157 583 PANTHER OSJNBA0019K04.7 PROTEIN 21 577 - -
Pumo4g04157 583 Gene3D - 169 515 - -
Pumo4g04157 583 SUPERFAMILY FAD/NAD(P)-binding domain 50 575 IPR036188 -
Pumo4g04157 583 ProSitePatterns GMC oxidoreductases signature 2. 283 297 IPR000172 GO:0016614|GO:0050660
Pumo4g04157 583 Gene3D - 52 565 IPR036188 -
Pumo4g04157 583 Pfam GMC oxidoreductase 52 324 IPR000172 GO:0016614|GO:0050660
Pumo4g04157 583 PIRSF Alcohol_oxidase 36 582 IPR012132 GO:0050660
Pumo4g04157 583 Pfam GMC oxidoreductase 420 566 IPR007867 GO:0016614
Pumo4g04157 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 320 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04157 Pumo-Chr4 82227592 82237004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04157 35 578 Miscellaneous Gene Families AT3G56060 52.095 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04157 K15403 - gmx:100818122 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04157 4 82227592 82237004 Pumo4g04157 4 82227592 82237004 ECH
Pumo4g04157 4 82227592 82237004 Pumo7g00344 7 4495338 4502210 PCT