Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00337 ATGAGCTTCAACAAGCTCATAGTGTGGAATGTGCCACTACTCCTGGTGGTGGTGGTGTTTGCATGTTCACTAATTGATCATGCTTCAGCTTCTGTTTCCTATGACCATAAGGCTATCACCATCAATGGACAAAGAAGGATACTCCTTTCTGGCTCCATTCACTACCCCAGAAGCACCCCTGAGATGTGGCCAGATCTTATTCAGAAGGCAAAGGAAGGAGGTTTGGATGTGATTCAAACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAGTATTATTTTGGGGGAAACTATGATCTGGTGAGGTTCATAAAGCTGGTACAGCAAGCAGGCCTCTATGTTAACCTCAGAATTGGTCCTTATGTTTGTGCTGAATGGAACTTCGGAGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGGACCTTTTAAGTTTCAAATGGAAAAGTTTACCAAGAAGATTGTGGATATGATGAAAGCAGAAAGGTTATTCGAGTCCCAGGGTGGTCCAATAATTTTATCCCAGATTGAAAATGAATACGGGCCTATGGAGTATGAAATTGGTGCTCCTGGTAGAGCCTACACTCAATGGGCAGCACATATGGCTGTAGGACTTGGCACCGGGGTTCCATGGATCATGTGCAAGCAAGACGATGCTCCTGATCCTATTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCGAAGATGTGGACAGAGGCCTGGACTGGCTGGTTTACTGAGTTTGGAGGTGCAGTTCCTCACAGACCTGCTGAGGACTTGGCATTTTCAATTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTATATGTATCATGGAGGAACAAATTTTGGTCGAACTGCTGGTGGTCCCTTTATTGCTACAAGCTATGATTACGATGCGCCTCTTGATGAATATGGATTGCCCAGACAGCCAAAGTGGGGTCATCTGAAGGATTTACATAGAGCAATAAAACTCTGTGAACCTGCTTTAGTATCTGGAGATCCTACTGTACAACGGCTTGGAAACTATGAAGAGGCTCATGTCTTTAGATCAAAATCTGGAGCTTGTGCTGCATTCCTTGCGAACTATAACCCACAATCTTATGCAACAGTGTCATTTGGAAATCAGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTAACTGCAAGCACACTGTTTATAACACTGCCAGGGTGAGACAAAAATCAAACAAACTTTTATTTCAGATTACTAGAGATGGGTTAGTTGGTTCTCAGAGCACAACGATGAAGATGACTCGCGTTCCTATTCATGGAGGACTATCTTGGAAAGCATTTAATGAAGAGACAACCACTACTGATGATAGTTCCTTCACCGTGACTGGTCTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTGATTACTTGTGGTACTCCACAGATGTTGTGATCAATTCCAATGAAGGATTTTTGAGGAATGGAAGGAATCCTGTTCTTACAGTTTTGTCTGCTGGGCATGCTTTGCATGTTTTTATCAACAATCAGCTGTCAGGAACTGCATATGGAAGCTTAGAGGCCCCCAAACTAACCTTTAGTGAAAGTGTAAGGCTCAGAGCTGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGGCTTCCGAATGTTGGTCCACATTTTGAAAGATGGAATGCTGGTGTTCTTGGCCCAATTACATTAAGTGGTCTGAATGAGGGGAGAAGGGACTTAACTTGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGCCTTGAATCTTCATTCTCTTAGTGGAAGTTCCTCTGTCGAGTGGCTTCAGGGGTATTTAGTTTCCAGAAGACAGCCATTGACTTGGTACAAAACTACCTTTGATGCCCCAGCTGGAGTTGCACCATTGGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTATGGATAAATGGACAAAGTCTGGGCCGCTACTGGCCTGCTTACAAAGCATCTGGTTCTTGTGGTTACTGTAACTATGCAGGAACTTACAATGAGAAGAAATGTGGAAGTAACTGTGGCGAGGCTTCTCAACGATGGTATCATGTTCCTCACTCATGGCTGAAGCCCACCGGAAATTTATTGGTTGTGTTTGAGGAATTGGGCGGGGATCCGAACGGGATCTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATCTATGAGTGGCAGCCAAATCTTGTAAGTTATCAGATGCAAGCTTCTGGCAAAGTCAGAACTCCTGTGAGACCAAAAGCACATTTGTCATGTGGTCCTGGACAAAAAATCTCATCAATCAAGTTTGCTAGCTTTGGCACTCCAGTAGGGTCTTGTGGAAACTATCGCGAAGGAAGTTGTCATGCTCACAAGTCATATGATGCTTTCCAAAAGAATTGTGTTGGCCAGAGCTGGTGCACAGTGACAGTGTCTCCTGAAATTTTTGGAGGAGATCCATGTCCAAGTGTCATGAAGAAGCTTTCAGTGGAAGCCGTTTGCACCTGA 2589 0.4349 MSFNKLIVWNVPLLLVVVVFACSLIDHASASVSYDHKAITINGQRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFGGNYDLVRFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMEKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRAYTQWAAHMAVGLGTGVPWIMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPHRPAEDLAFSIARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPRQPKWGHLKDLHRAIKLCEPALVSGDPTVQRLGNYEEAHVFRSKSGACAAFLANYNPQSYATVSFGNQHYNLPPWSISILPNCKHTVYNTARVRQKSNKLLFQITRDGLVGSQSTTMKMTRVPIHGGLSWKAFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVINSNEGFLRNGRNPVLTVLSAGHALHVFINNQLSGTAYGSLEAPKLTFSESVRLRAGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLSGLNEGRRDLTWQKWSYKVGLKGEALNLHSLSGSSSVEWLQGYLVSRRQPLTWYKTTFDAPAGVAPLALDMGSMGKGQVWINGQSLGRYWPAYKASGSCGYCNYAGTYNEKKCGSNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYQMQASGKVRTPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNYREGSCHAHKSYDAFQKNCVGQSWCTVTVSPEIFGGDPCPSVMKKLSVEAVCT 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00337 862 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Pumo7g00337 862 CDD Gal_Rha_Lectin_BGal 779 861 - -
Pumo7g00337 862 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Pumo7g00337 862 PANTHER BETA-GALACTOSIDASE RELATED 25 763 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 FunFam Beta-galactosidase 296 424 - -
Pumo7g00337 862 Gene3D - 767 862 IPR043159 -
Pumo7g00337 862 FunFam Beta-galactosidase 467 604 - -
Pumo7g00337 862 Gene3D Glycosidases 28 348 - -
Pumo7g00337 862 Gene3D - 623 753 - -
Pumo7g00337 862 Pfam Galactose binding lectin domain 784 861 IPR000922 GO:0030246
Pumo7g00337 862 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Pumo7g00337 862 FunFam Beta-galactosidase 27 347 - -
Pumo7g00337 862 FunFam Beta-galactosidase 612 753 - -
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 639 653 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 PRINTS Glycosyl hydrolase family 35 signature 666 682 IPR001944 GO:0004553|GO:0005975
Pumo7g00337 862 ProSiteProfiles SUEL-type lectin domain profile. 776 862 IPR000922 GO:0030246
Pumo7g00337 862 Pfam Glycosyl hydrolases family 35 39 343 IPR031330 -
Pumo7g00337 862 SUPERFAMILY Galactose-binding domain-like 603 770 IPR008979 -
Pumo7g00337 862 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Pumo7g00337 862 SUPERFAMILY Galactose-binding domain-like 406 594 IPR008979 -
Pumo7g00337 862 FunFam Beta-galactosidase 772 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00337 Pumo-Chr7 4421428 4427103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00337 4 862 Glycoside Hydrolase AT3G13750 78.463 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00337 - - gmx:100785688 1731.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00337 7 4421428 4427103 Pumo7g00337 7 4421428 4427103 ECH
Pumo4g04161 4 82307297 82313764 Pumo7g00337 7 4421428 4427103 PCT