Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00167 ATGTTTATATGCAGAGAAAAGGAGAGTATTCAATTTAAATATATAGTTTTTCCCTTAAGGTCTGTTACTTTAATACATCATTCATTAGTTCTCTTGAGGCAGGTGATCCTGAATCCCAAGCTAGAGAAGAAGGGCAAGAGGACTGCTCTATTTTTTGAAGGGTGCTTGAGTGTTGACGGGTTTAGAGCAGTGGTGGAGCGACACCTTGACGTTGAAGTTACAGGTTTGGATCGTTATGGTGCGCCAATCAAAATAAATGCTTCCGGCTGGCAGGCTCGGATTTTACAACATGAGTGTGATCACTTGGATGGAACTCTGTATGTTGATAAAATGGTACCTAAAACTTTCAGAACTGTGGACAACCTGGAGCTGCCTCTTGCCCAGGGGTGCCCCAAACTTGGTCCTCGCTGA 411 0.4355 MFICREKESIQFKYIVFPLRSVTLIHHSLVLLRQVILNPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMVPKTFRTVDNLELPLAQGCPKLGPR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00167 136 Pfam Polypeptide deformylase 33 114 IPR023635 GO:0042586
Pumo7g00167 136 Gene3D Peptide deformylase 21 135 IPR036821 -
Pumo7g00167 136 FunFam Peptide deformylase 20 130 - -
Pumo7g00167 136 SUPERFAMILY Peptide deformylase 25 119 IPR036821 -
Pumo7g00167 136 PRINTS Peptide deformylase signature 53 64 IPR023635 GO:0042586
Pumo7g00167 136 PRINTS Peptide deformylase signature 84 113 IPR023635 GO:0042586
Pumo7g00167 136 PRINTS Peptide deformylase signature 65 83 IPR023635 GO:0042586
Pumo7g00167 136 PANTHER PEPTIDE DEFORMYLASE 33 131 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00167 Pumo-Chr7 1886668 1888157 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00167 K01462 - gmx:100784292 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00167 7 1886668 1888157 Pumo7g00167 7 1886668 1888157 ECH
Pumo4g04303 4 84077757 84079991 Pumo7g00167 7 1886668 1888157 PCT