Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04303 ATGTGGGAGTGGGAGTGGGAGAAAGTGAAAGCGGAAAGCATGGAAGTGGTGCAGCGGGTGGCGTCCCGGCTGCGTGTGGTACCGAAACCGATGTTCGAAAACGGTGTCGTCGTAATGAGCTCAGTTTCAGGTTCGGGGTGGTTTGTGGGCGGTGGAGGGAAGTTGCCGAAAATAGTGAAAGCTGGAGAGCCTGTTCTGCACGAGCGAGCCAAAGAAGTTGAGGCCGTTGATATGAAGTCGGAGAGAGTGCAGAAGATCATCGACGACATGATCCGTGTCATGAGAAAAGCACCTGGGGTTGGTCTCGCTGCCCCACAGATTGGAATCCCCTTAAGGATTATTGTTTTGGAAGATAAAAGAGAATATATGGGTTATGCGGCAAAGGAAGAGGTCAAGGCACAAGATAGAAGACCTTTTGATCTTTTGGTCATCCTCAATCCTAAGCTAAAGAACAACACCAACAGGACTGCCCTATTTTTTGAAGGCTGCTTGAGTGTTTCTGGGTATAGTGCTGTGGTAGAGCGGTACCTTGATGTTGAGGTTGCAGGTTTTGATCGTTATGGTGAACCCATCAAAATAAATGCAACTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACCTGGATGGAACACTGTATGTTGATAAGATGGTACCTAGAACTTTCAGAGCTCCAGAAAACAGTTATAAGCCTCTTGCCCATGGGTGCCCTAAACTTGGCCCTCGCTAA 735 0.4844 MWEWEWEKVKAESMEVVQRVASRLRVVPKPMFENGVVVMSSVSGSGWFVGGGGKLPKIVKAGEPVLHERAKEVEAVDMKSERVQKIIDDMIRVMRKAPGVGLAAPQIGIPLRIIVLEDKREYMGYAAKEEVKAQDRRPFDLLVILNPKLKNNTNRTALFFEGCLSVSGYSAVVERYLDVEVAGFDRYGEPIKINATGWQARILQHECDHLDGTLYVDKMVPRTFRAPENSYKPLAHGCPKLGPR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04303 244 CDD Pep_deformylase 58 215 IPR023635 GO:0042586
Pumo4g04303 244 NCBIfam peptide deformylase 57 222 IPR023635 GO:0042586
Pumo4g04303 244 SUPERFAMILY Peptide deformylase 56 230 IPR036821 -
Pumo4g04303 244 Gene3D Peptide deformylase 54 242 IPR036821 -
Pumo4g04303 244 Hamap Peptide deformylase [def]. 54 234 IPR023635 GO:0042586
Pumo4g04303 244 FunFam Peptide deformylase 55 238 - -
Pumo4g04303 244 Pfam Polypeptide deformylase 57 222 IPR023635 GO:0042586
Pumo4g04303 244 PRINTS Peptide deformylase signature 192 221 IPR023635 GO:0042586
Pumo4g04303 244 PRINTS Peptide deformylase signature 88 117 IPR023635 GO:0042586
Pumo4g04303 244 PRINTS Peptide deformylase signature 161 172 IPR023635 GO:0042586
Pumo4g04303 244 PRINTS Peptide deformylase signature 173 191 IPR023635 GO:0042586
Pumo4g04303 244 PANTHER PEPTIDE DEFORMYLASE 55 230 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04303 Pumo-Chr4 84077757 84079991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04303 K01462 - gmx:100306710 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04303 4 84077757 84079991 Pumo4g04303 4 84077757 84079991 ECH
Pumo4g04303 4 84077757 84079991 Pumo7g00167 7 1886668 1888157 PCT