Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00150 ATGCCTGGACGAAAAGTTTTGCATCACCCCGATCGAGGATTGCTTAATTATGATTTCTTCACCCTTGACGTTACCGTTATTGAATTACATATTACAGGGAAACCCACATCATTTCCAAGAGTGGAATGCTCTATCATTCTTAATATCCTCACACTACTACGGACCATGTTCTCTTCCTCAACTTCCTTCTTTCTTTGCCTTCTCATCTTCTCTGTAACATCTTCTCACGTTTTGGGGGATAAAGTACTTACAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTACCTTCTCCTGAGAGTGTGGTGACCCTTCTGAAAGCTGCGAAGATTAGGAACATCAGAATATATGATGCTGATCATCAAGTCCTGAGTGCCTTCAAAGGGTCAGGAATTGCAATCATTATTGGGCTACCAAATGAGTTTCTGAAAGACATAAGTACTGGGGAGGATCGTGCCATGAATTGGATCAAAGAAAATGTTCAGCCATTTCTTCCAGGAACCAAAATTCGTGGCATTGCCGTGGGGAATGAGATATTGGGAGGGGGAGATATGGAGCTATGGCAAGTTTTGCTACCAGCAGCTAAAAATGTGTACAGTGCCCTTGATAGGCTTAATTTGGCACATCAAATTCAGGTAGTCAAGTCCACATTCAGAGGCTGTGTTTGCAAATTCCTACCCTCCATCTGCATGCACTTTTAG 708 0.4251 MPGRKVLHHPDRGLLNYDFFTLDVTVIELHITGKPTSFPRVECSIILNILTLLRTMFSSSTSFFLCLLIFSVTSSHVLGDKVLTGTYGVNYGRIADNLPSPESVVTLLKAAKIRNIRIYDADHQVLSAFKGSGIAIIIGLPNEFLKDISTGEDRAMNWIKENVQPFLPGTKIRGIAVGNEILGGGDMELWQVLLPAAKNVYSALDRLNLAHQIQVVKSTFRGCVCKFLPSICMHF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00150 235 SUPERFAMILY (Trans)glycosidases 87 220 IPR017853 -
Pumo7g00150 235 Gene3D Glycosidases 86 232 - -
Pumo7g00150 235 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 70 219 IPR044965 GO:0004553|GO:0005975
Pumo7g00150 235 Pfam Glycosyl hydrolases family 17 88 223 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00150 Pumo-Chr7 1775532 1776663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00150 85 232 Glycoside Hydrolase AT3G15800 71.523 9.65e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00150 - - vra:106773873 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00150 7 1775532 1776663 Pumo7g00150 7 1775532 1776663 ECH
Pumo4g04332 4 84305252 84307245 Pumo7g00150 7 1775532 1776663 PCT