Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04332 ATGCTTAGACTAAACATGATGTTCTCTTCCTTTTTTCTTTGGCTTCTGCTCTTCTCTCCATTATTTTCTCATGTTTTAGGGGACAAAGCATTCACAGGAACATATGGAGTAAACTATGGTAAGATAGCTGACAACTTACCTCCCCCAGAAAGCGTGGTTACCCTACTCAAAGCAGCAAAAATTAAGAACATTAGGATATATGATGTTGATCGTCAAGTCCTCCGTGCCTTCAAAGGGTCTGGCATTGAAATTGTGGTTGGACTTGGCAATGAATTTCTCAAGGACATGAGTGTGGGGGAGGATAGAGCCATGAGTTGGGTCAAAGAAAATGTTCAGTCATTTCTTCCAGGAACCAAAATTCGCGGAATTGCGGTGGGAAATGAAATCTTGGGAGGCACGGATATGGAACTCTGGCAAGTTTTGCTGCCTGCAGCAAAGAATGTTTATAATGCCCTTAGTAAGCTTGGTCTAGCAAAAGATGTTCAGGTGTCAAGTCCACATTCTGAGGCTGTGTTTGCTAATTCCTTTCCTCCTTCTTCATGCACTTTCAAGGAAGATGTCCTTCCATATATGAAACCTCTCTTACAATTCTTCTCACAAATTGGCACTCCTTTTTTCATTAATGCATATCCCTTCCTTGCCTATAAGAATGATCCACAACATATTGACCTTAACTATGCCCTCTTCCTAAAAAATCCTGGGATTTATGATGCAAAGACTAAGCTGCATTATAATAACATGTTTGATGCTCAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGGTTGGGTTTGACAAGATGGATGTTATTGTTTCTGAGACTGGTTGGGCTTCTCATGGGGATGAGAATGAAGCTGGAGCAACAATAAAAAATGCAAGGACCTATAATGGTAATTTGCGCAAGCGGTTACTCAAGAAGAAAGGGACCCCTTATAGGCCAAAAAAAGTGGTGAGGGCTTATATCTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGCCCAACATCCGAGAGAAACTTTGGCTTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTACCTTCTTCGGCAACTTCATGTTTACTTTCCTTCAAGGGTATTGGATCCTCCTTCATGATGGCTTTTACAAGTTTTGCTGCTTTTCTTTTTGTAGCATTGTAA 1176 0.4099 MLRLNMMFSSFFLWLLLFSPLFSHVLGDKAFTGTYGVNYGKIADNLPPPESVVTLLKAAKIKNIRIYDVDRQVLRAFKGSGIEIVVGLGNEFLKDMSVGEDRAMSWVKENVQSFLPGTKIRGIAVGNEILGGTDMELWQVLLPAAKNVYNALSKLGLAKDVQVSSPHSEAVFANSFPPSSCTFKEDVLPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFLKNPGIYDAKTKLHYNNMFDAQVDAAYAALEKVGFDKMDVIVSETGWASHGDENEAGATIKNARTYNGNLRKRLLKKKGTPYRPKKVVRAYIFALFNENLKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSCLLSFKGIGSSFMMAFTSFAAFLFVAL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04332 391 FunFam Glucan endo-1,3-beta-glucosidase 14 33 359 - -
Pumo4g04332 391 SUPERFAMILY (Trans)glycosidases 35 353 IPR017853 -
Pumo4g04332 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 365 IPR044965 GO:0004553|GO:0005975
Pumo4g04332 391 Pfam Glycosyl hydrolases family 17 36 354 IPR000490 GO:0004553|GO:0005975
Pumo4g04332 391 Gene3D Glycosidases 34 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04332 Pumo-Chr4 84305252 84307245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04332 30 363 Glycoside Hydrolase AT3G15800 75.821 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04332 - - gmx:100815468 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04332 4 84305252 84307245 Pumo4g04332 4 84305252 84307245 ECH
Pumo4g04332 4 84305252 84307245 Pumo7g00150 7 1775532 1776663 PCT