Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00139 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCATCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCATCTTCGCCGATTCGGTTCCCTCCTCCCTCTCCCATCGACCAACTTCGCCCTCTCTTTCCCCACATGGACGACCTGGTTCTTGAGAGAGCTCTCCAAGAATGTGGCAATGATATAGATGCTGCCATCAAGAGGCTGAATGAGCTTTGCTTGGGAACTGCCGATGGAAATGGAACCGCTGAAGAATCGGAGGTTGTCGTTAATGTGGATGCAGGTAAATTAGAAGGTGATGGAAATGCTTCTGTTTCTGAGGACCAGCCTGCTTTGAACAACCACCTTCCTGCAGATGGAGCAGAATGGATTGACTTTTTTGTCAGGGAAATGATGGTTGCTACTAGTGTTGACGATGCTAGAGCCCGTGCTGCCAGAATGCTGGAGGTTCTAGAGAAATCAATCAGTGAAAGAGCAAGGGCTGAGGCAACTGATGCGCTTCAGAAGGAAAATTTGATGCTGAAAGAGCAAATTGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATTTGCTGATTATGAGGTTAAGAACCAAGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCCTTTCCTGGGCGCTTCCCACCTGATGTCTTCTAA 783 0.4662 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPPSPIDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGTADGNGTAEESEVVVNVDAGKLEGDGNASVSEDQPALNNHLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNPFPGRFPPDVF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00139 260 Coils Coil 169 196 - -
Pumo7g00139 260 CDD CUE 39 74 - -
Pumo7g00139 260 Pfam CUE domain 41 76 IPR003892 GO:0043130
Pumo7g00139 260 SUPERFAMILY UBA-like 39 81 IPR009060 GO:0005515
Pumo7g00139 260 Coils Coil 207 234 - -
Pumo7g00139 260 Gene3D - 38 79 - -
Pumo7g00139 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Pumo7g00139 260 ProSiteProfiles CUE domain profile. 36 81 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00139 Pumo-Chr7 1671697 1675721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00139 - - gmx:100813137 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00139 7 1671697 1675721 Pumo7g00139 7 1671697 1675721 ECH
Pumo4g04339 4 84382669 84385341 Pumo7g00139 7 1671697 1675721 PCT