Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04339 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTGTTCGAAGAGCTTCCCCCTTCCCCGCCAGTATCCAAGAGGCTCCGCTGTTCTTCCTCTCCTATTCGCCTCTCTCTTCCTTCCCTCATCGACCACCTTCGCTCTCTCTTCCCTCATATGGATGACCAGGTCCTCGAGAGAGCGCTCCAAGAATGTGGCAATGACCTAGATGCTGCCATCAAGAGCCTCCACGGCCTCTGTTTGGGATCCGCTGATGATAATTTTCATACTGCTCCACAACCTGACCACCCTAACGTCGTCGACACAGGTGCGTTGGAAGAGAATGGGGATGCTTCTGCTTCTGGGGATCAGCCGGCTTCTGGCAATTTTCCTGCAGATGGAGCGGAATGGATTGATTTGTTTGTTAGAGAGATGACGTGTGCTTCTAGTGTTGATGATGCCAGAGCCCGTGCTGCTAGATTGCTGGAGGTTTTAGAGAAATCGATCAGTGCACACGCGACTTCCGGGGCAACAACTGCTCTTCAAAGGGAAAATTTGATGCTGAAGGAGCAAATTGAAGCGTTGACTAAGGAGAAAAATTGTTTTAAAAGTGCTTTTAGAATCCAGCTCGAACGTCTTTCTGATTATGAGAATAAAAACCAGGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATATCAGGAACAGATCAGAACTCTTGAGGTGAATAACTATGCTTTGCGAATGCATTTGAATCAGGCACAACAGTACAACCCTTTTCCTGGGCGTTTCCCTCCTGATGCCTTCTAG 783 0.4866 MSAAVCGSKRSLFEELPPSPPVSKRLRCSSSPIRLSLPSLIDHLRSLFPHMDDQVLERALQECGNDLDAAIKSLHGLCLGSADDNFHTAPQPDHPNVVDTGALEENGDASASGDQPASGNFPADGAEWIDLFVREMTCASSVDDARARAARLLEVLEKSISAHATSGATTALQRENLMLKEQIEALTKEKNCFKSAFRIQLERLSDYENKNQELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQQYNPFPGRFPPDAF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04339 260 CDD CUE 39 74 - -
Pumo4g04339 260 MobiDBLite consensus disorder prediction 86 120 - -
Pumo4g04339 260 Gene3D - 38 79 - -
Pumo4g04339 260 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Pumo4g04339 260 SUPERFAMILY UBA-like 37 82 IPR009060 GO:0005515
Pumo4g04339 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Pumo4g04339 260 Coils Coil 169 189 - -
Pumo4g04339 260 Pfam CUE domain 39 73 IPR003892 GO:0043130
Pumo4g04339 260 Coils Coil 197 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04339 Pumo-Chr4 84382669 84385341 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04339 - - gmx:100815998 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04339 4 84382669 84385341 Pumo4g04339 4 84382669 84385341 ECH
Pumo4g04339 4 84382669 84385341 Pumo7g00139 7 1671697 1675721 PCT