Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02347 ATGGCACCGAAGCGCATTTATGAAGCATGGAAAGGAAGTAATAAATTCCTATTTGGAGGAAGGTTGATGTTTGGACCGGATGCCAGGTCACTGCTTGTCACCTTGTTGCTGATCATTGTTCCAGTTATCGTCTTTTGTGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTTAATATTTATGTGTTGATTCTTCTCTTTCTTACTTCCTCTCGCGATCCGGGCATTATTCCAAGGAATTTACATCCACCAGAGGAAGAGTTCCACTCTTCAGTTTCTGTTGATATTGGGGGACGCCAAACTCCAAGCCTTCAGTTCCCTCGAACAAAAGAAGTAATGGTCAATGGCCATGCTGTGAGGGTGAAGTATTGTGACACTTGTATGCTGTATCGTCCTCCTCGTTGTTCGCATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGTATTGGGCTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCGGCAACTATTCTATGTATCTATGTGTTTTCAATCTCAGCTTTTTACATCAAGGTTCTGATGGATCATTATAACGGGACAGTTTGGAAGGCAATGAAAGAATCCCCTGCATCAGTTATATTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTCGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGGTACAGAGCCGATAACAGGGTCAATGTTTACAACCGGGGTTGTTTAAACAATTTCCTGGAAGTATTTTGTACAAAAGTGAAGCCCTCGAGGAACAATTTCCGAGCTTTTGTTCAAGAGGAGGTACCGAGGCCACCCCCTCCGGTCATATCCCGGGAACATGAACCAGATCTGGGTGGAGATCCTCGTTCTAAAGTTGAAGACGATCTAGATATCGGTGAAGACCTGTTAAAGATATCACAACGTCGGAATATTGAAGAAATTGACTGA 1050 0.4257 MAPKRIYEAWKGSNKFLFGGRLMFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSSRDPGIIPRNLHPPEEEFHSSVSVDIGGRQTPSLQFPRTKEVMVNGHAVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATILCIYVFSISAFYIKVLMDHYNGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRVNVYNRGCLNNFLEVFCTKVKPSRNNFRAFVQEEVPRPPPPVISREHEPDLGGDPRSKVEDDLDIGEDLLKISQRRNIEEID 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02347 349 ProSiteProfiles DHHC domain profile. 137 187 - -
Pumo6g02347 349 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 300 - -
Pumo6g02347 349 Pfam DHHC palmitoyltransferase 136 261 IPR001594 GO:0016409
Pumo6g02347 349 MobiDBLite consensus disorder prediction 305 328 - -
Pumo6g02347 349 MobiDBLite consensus disorder prediction 307 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02347 Pumo-Chr6 46350591 46362031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02347 65 283 Lipid Metabolism Gene Families AT4G22750 28.017 1.65e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02347 K16675 - gmx:100795934 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02347 6 46350591 46362031 Pumo6g02347 6 46350591 46362031 ECH
Pumo6g02347 6 46350591 46362031 Pumo3g01149 3 18662205 18667101 PCT