Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01149 ATGGCTGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATGTGGAGGGAGGTTGGTATTTGGGCCCGACGCTAGGTCCCTGTTTGTCACCTTGTTGCTGATTATTATTCCAGTTATATTCTTTTGTGCATGTGTAGCAAGGCATCTTCGGCATGAATTTTCTTCATATAATTCTGGATATGCTATTTTAGCAGTGGCTATTCTCTTTACTATTCATGTCCTGGTGGTTCTCTTTCTTACTTCATCAGGTGATCCGGGCATCGTTCCAAGGAATCCACATCCACCAGAAGAAGAGTTTCGTTATGATTCTTCAGTTTCTGTTGATGCTGGGGGAGCTGGACGACAAACGCCAAGTCTTCAGTTCCCTCGAACAAAAGAAGTTATAGTCAATGGCATGGCTGTAAGGGTGAAATATTGTGAGACTTGTATGCTGTATCGTCCTCCTCGTTGCTCGCATTGCTCCATTTGCAACAACTGTGTTGAGCGTTTTGATCACCATTGCCCTTGGGTGGGCCAATGCATCGGTCTGAGGAACTATCGATACTTCTTTATGTTTGTTTCTTCAGCAACTATTCTGTGCATCTATGTGTTTTCCCTCTCAGCTTTTTACATCAAGGTTCTGATGGATAATTATGACAGCACAGTTTGGAAGGCAATGAAAGAATCTCCTGCATCTGTGATACTAATGGCTTATTGTTTCATCTCTCTGTGGTTTGTTGGTGGACTAACTGGTTTTCATTTATACCTTATAGGCACAAATCAGACTACCTATGAAAATTTCCGGTACAGAGCTGACGGCAGGATCAATGTTTTTAACCGGGGTTGTTTAAGTAATTTTCTGGAAGTGTTTTGCACAAAAGTAAAGCCCTCAAGGAACAATTTCAGGGCATTTGCTCGAGAGGAGGTACCACCAAGACCGCTGCCTCCGATCATTCCCCGGGATCGTGAACCGAATGACTTGGCCGGAGATCGCCGTCCCAAGGTTGAAGCTGATCTTGACATTGGTGAAGACCTATTGAAGATATCACAGCGCAGGAACATCGAAGAACTTGACGAGGAGATTCGGAGCAGAGGGGGCAATGGACCGCCCCACAATACATCTGAACCTGACTCAATTTTGTCCTCAGATCATCGAGCTCCCACAATTCGATCTGATGCTAGGCACTCAAGTTGGGAAAGGAGTGGAAACTGGGAGATTGCACAAGAGGTCCTTGCCAATTCAAATGTCACAGAAAGCAGAAACTATGCGACTTCAAAGGAAATGCGCCAATGA 1284 0.4447 MAAKRVYQVWKGSNKFICGGRLVFGPDARSLFVTLLLIIIPVIFFCACVARHLRHEFSSYNSGYAILAVAILFTIHVLVVLFLTSSGDPGIVPRNPHPPEEEFRYDSSVSVDAGGAGRQTPSLQFPRTKEVIVNGMAVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATILCIYVFSLSAFYIKVLMDNYDSTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNRGCLSNFLEVFCTKVKPSRNNFRAFAREEVPPRPLPPIIPRDREPNDLAGDRRPKVEADLDIGEDLLKISQRRNIEELDEEIRSRGGNGPPHNTSEPDSILSSDHRAPTIRSDARHSSWERSGNWEIAQEVLANSNVTESRNYATSKEMRQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01149 427 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 36 305 - -
Pumo3g01149 427 MobiDBLite consensus disorder prediction 309 331 - -
Pumo3g01149 427 MobiDBLite consensus disorder prediction 356 399 - -
Pumo3g01149 427 Pfam DHHC palmitoyltransferase 141 265 IPR001594 GO:0016409
Pumo3g01149 427 ProSiteProfiles DHHC domain profile. 141 191 - -
Pumo3g01149 427 MobiDBLite consensus disorder prediction 364 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01149 Pumo-Chr3 18662205 18667101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01149 65 287 Lipid Metabolism Gene Families AT4G22750 27.660 3.59e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01149 K16675 - gmx:100820208 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02347 6 46350591 46362031 Pumo3g01149 3 18662205 18667101 PCT