Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02335 ATGGCTGCTGCTAGAAAAGTTGTTGTCAACGAACAAAGACTATTGGAAAAGTTGTCAGAAAAGTGGGAGATTGACGATTTTTGGGAACTTTGCAGCGGAATAGTGACGACAGATGGAAGGGCAAACCTGATGGGGAACACTGGTTTGACAATACGACCAAATAAAGGAAACACCAGTGGTAAAGTTGTGAGAAGCAGAAAGAACATGGCCCCGGCTAGCAAGGCTGAGAAAAAGGCTGCTGTGGATGCAGCTGCATGGATGTTCAATGTTGTTACATCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGCCACTTATGGCTTCAGTTTTGCCACAACATTAACAGGCATGCACTTCGCTACCACAACTTTGATGACAGCTGTACTAAGGATGCTGGGATATGTCCAGCCTTCTCATTTACCCTTGCCAGATCTTCTAAAATTTGTTATCTTTGCTAACTTCTCTATTGTTGGAATGAATGTTAGTCTAATGTGGAACTCAGTTGGATTCTATCAAATTGCAAAGTTAAGTATGATCCCTGTATCATGCCTATTGGAAGTTGTTCTCGACAAGATTCGGTATTCAAGAGACACAAAACTGAGCATAGGTGTTGTTCTTTTGGGTGTTGGTGTTTGCACTGTCACTGATGTGAGTGTTAACGCAAGAGGATTCATTGCTGCCTTTATAGCAGTATGGAGCACTTCTATGCAACAATATTATGTTCATTTCCTTCAACGGAAGTATTCTCTAAGTTCTTTCAACCTATTGGGACATACAGCACCTGCACAGGCTGCATCATTACTGTTATTAGGACCTTTTCTAGATTATTGGTTGACAAACAAAAGAGTTGACAGATATGACTACAGCACTGCCTCGTCGATATTCATATTCCTGTCATGCACTATTGCAGTTGGCACCAACCTAAGCCAATTTATCTGCATTGGCAGATTCACTGCTGTTTCTTTTCAAGTACTGGGACATATGAAGACAATACTTGTTTTAATCATGGGGTTCTTTTTCTTTGGGAAAGAGGGTCTCAATCTCCAAGTGGTTTTTGGAATGATCATAGCCGTGGCCGGAATGATTTGGTATGGCAATGCCTCATCCAAGCCTGGCGGAAAGGAGCGCCGCAGTCACACTCTTCCTACAAACAAAACAGAAACAAGATAG 1173 0.4169 MAAARKVVVNEQRLLEKLSEKWEIDDFWELCSGIVTTDGRANLMGNTGLTIRPNKGNTSGKVVRSRKNMAPASKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMATYGFSFATTLTGMHFATTTLMTAVLRMLGYVQPSHLPLPDLLKFVIFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNARGFIAAFIAVWSTSMQQYYVHFLQRKYSLSSFNLLGHTAPAQAASLLLLGPFLDYWLTNKRVDRYDYSTASSIFIFLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNLQVVFGMIIAVAGMIWYGNASSKPGGKERRSHTLPTNKTETR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02335 390 PANTHER SOLUTE CARRIER FAMILY 35 85 369 - -
Pumo6g02335 390 MobiDBLite consensus disorder prediction 370 390 - -
Pumo6g02335 390 Pfam Triose-phosphate Transporter family 91 365 IPR004853 -
Pumo6g02335 390 MobiDBLite consensus disorder prediction 373 390 - -
Pumo6g02335 390 Coils Coil 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02335 Pumo-Chr6 46043733 46047320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02335 86 388 Organic Solute Cotransporters AT1G21870 25.472 4.95e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02335 K26224 - gmx:100786437 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02335 6 46043733 46047320 Pumo6g02335 6 46043733 46047320 ECH
Pumo6g02335 6 46043733 46047320 Pumo3g01160 3 18764366 18769097 PCT