Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01160 ATGGCTCCGTCTAGCAAGGCTGAGAAGAAGGCAGCAGTGGATGCAGCTGCATGGGTGTTCAATGTTGTCACTTCTGTTGGAGTTATCATTGTAAACAAAGCTTTGATGGCCACTTATGGCTTCAGTTTTGCTACAACATTAACAGGTCTTCATTTCGCTACTACCACTTTGATGACAGCCTTACTAAGGATTCTGGGATATGTCCAGCCTTCTCATTTACCCTTACCAGAGCTTCTAAAATTTGTTTTCTTTGCAAACTTCTCCATTGTTGGAATGAATGTCAGTCTAATGTGGAACTCAGTTGGATTCTATCAGATTGCTAAGTTGAGTATGATCCCTGTATCCTGCCTGTTAGAAGTTGTTTTCGACAAGATTCGCTATTCAAGAGATACGAAACTGAGCATAGGTGTTGTTCTTTTGGGTGTTGGTGTTTGCACTGTTACTGATGTGAGTGTTAACACAAAAGGTTTCGTAGCTGCCTTTATAGCAGTGTGGAGCACTTCTCTGCAACAATATTATGTTCATTTCCTTCAACGGAAGTATTCACTAAGTTCTTTCAACCTTTTGGGACATACAGCACCTGCACAGGCTGCATCACTACTCCTGTTCGGCCCTGTTCTAGACTATTGGTTGACAAACAACAGAGTTGACAAATATGCTTATAATGCAGGTTCTTTGATGTTCATATTTATGTCGTGCACTATAGCAGTTGGGACCAACCTCAGCCAATTTATCTGCATTGGCAGATTCACTGCTGTCTCTTTTCAAGTACTTGGCCATATGAAGACAATACTAGTTTTAATAATGGGGTTCTTTTTCTTTGGGAGGGATGGTCTTAATGTTCACGTGGTTTTGGGGATGGTTATAGCTGTGTTTGGAATGATATGGTATGGTAATGCCTCATCAAAGCCTGGTGGAAAGGAGCGTTTGAATCACACTCTCCCCACCAACAAAATAGAAAACCGGTAG 969 0.4149 MAPSSKAEKKAAVDAAAWVFNVVTSVGVIIVNKALMATYGFSFATTLTGLHFATTTLMTALLRILGYVQPSHLPLPELLKFVFFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNTKGFVAAFIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQAASLLLFGPVLDYWLTNNRVDKYAYNAGSLMFIFMSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGRDGLNVHVVLGMVIAVFGMIWYGNASSKPGGKERLNHTLPTNKIENR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01160 322 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Pumo3g01160 322 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01160 Pumo-Chr3 18764366 18769097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01160 18 320 Organic Solute Cotransporters AT1G21870 25.625 4.07e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01160 K26224 - gmx:100776319 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02335 6 46043733 46047320 Pumo3g01160 3 18764366 18769097 PCT