Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01204 ATGTCTGCTGCTGTGTCTGCAACCAAGGATGTTCCCTTCAATGCTCATTTGGAGGAAGATATGAAAAACAAAGGAACCAACAAGGTTGTTGGGGAAGCAGACCAGCTTCCTTACAATGATGATGCTGAAGGAACCGAGTCAGAAGCAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGTCCTCAGTGTTCCCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAGGTATTGATGTCTCTGCTGTTGGAGAGAACAAAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATAATATGTCCAGGGAGGCCTGACCTCATCCTACCAATTCCGTTTACTTCTGAAGCTAATAAAAAGAGTATCTTCACACTTAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAACACCAAAAAAATGTTGGGAACTTATAGCCCAAGCCAGGAACCATATACCTATGAATTGGAAGAAGAAACTACCCCTTCGGGGTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGATACTAGTTACCACTTTGAAATTCAGAAGAATTGGCCTACATCTAAGATTCAATCTTAA 723 0.4246 MSAAVSATKDVPFNAHLEEDMKNKGTNKVVGEADQLPYNDDAEGTESEAEEDPKLELDLGPQCSLKEQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLILPIPFTSEANKKSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNTKKMLGTYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTSYHFEIQKNWPTSKIQS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01204 240 SUPERFAMILY E set domains 43 234 IPR014756 -
Pumo6g01204 240 MobiDBLite consensus disorder prediction 13 27 - -
Pumo6g01204 240 MobiDBLite consensus disorder prediction 39 53 - -
Pumo6g01204 240 Pfam RHO protein GDP dissociation inhibitor 45 232 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 PRINTS RHO protein GDP dissociation inhibitor signature 92 107 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 PRINTS RHO protein GDP dissociation inhibitor signature 153 169 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 PRINTS RHO protein GDP dissociation inhibitor signature 170 185 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 PRINTS RHO protein GDP dissociation inhibitor signature 212 229 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 PANTHER RHO GDP-DISSOCIATION INHIBITOR 45 234 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo6g01204 240 MobiDBLite consensus disorder prediction 1 61 - -
Pumo6g01204 240 FunFam Rho GDP-dissociation inhibitor 1 55 235 - -
Pumo6g01204 240 Gene3D Coagulation Factor XIII, subunit A, domain 1 56 235 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01204 Pumo-Chr6 15919221 15921515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01204 K12462 - gmx:100780525 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00476 1 6362272 6363781 Pumo6g01204 6 15919221 15921515 PCT