Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00476 ATGTCTGCCGCTGTGTCCTCCACAACCACTCATTTAGAGGAAGAGCTCAAAAACAAGGCAACAGACAACAAAGTTGGTGGGGAACCAGATCAGCCACCTTACAATGATGGTGCCAATTCTGATGTTGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATCTAACAAAGAACTGGATCTTGGTCCTCAATTCACCCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGATATGTCTGTCGTTGGAGCTGAAAGTAAAGACCCTGAAGTGAAGATCTTGAGCCTCACTATTGCAAGCCCTGACAAGCCCGACCTCACCCTGCCAATTCCATTTACTACTGATCCTAAGAAGAGTCTCTTCATCCTTAAGGAAGGAAGCAAATGTCGCATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAATGTTGTTTGGAAAACTGGCGTTAGAGGTGAGAATACTCTTTGTCTCGTGTTTACTTTGACTTTTGTTTTTTCTAGGTGGAATTTACTTTAA 588 0.4252 MSAAVSSTTTHLEEELKNKATDNKVGGEPDQPPYNDGANSDVAEETEPEEDDDSKLESNKELDLGPQFTLKEQLEKDKDDESLRKWKEQLLGSVDMSVVGAESKDPEVKILSLTIASPDKPDLTLPIPFTTDPKKSLFILKEGSKCRMKFTFTVSNNIVSGLKYTNVVWKTGVRGENTLCLVFTLTFVFSRWNLL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00476 195 Gene3D Coagulation Factor XIII, subunit A, domain 1 58 182 IPR024792 -
Pumo1g00476 195 PANTHER RHO GDP-DISSOCIATION INHIBITOR 45 178 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo1g00476 195 MobiDBLite consensus disorder prediction 1 68 - -
Pumo1g00476 195 Pfam RHO protein GDP dissociation inhibitor 49 178 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Pumo1g00476 195 SUPERFAMILY E set domains 43 176 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00476 Pumo-Chr1 6362272 6363781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00476 K12462 - gmx:100797593 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00476 1 6362272 6363781 Pumo6g01204 6 15919221 15921515 PCT