Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00686 ATGGGTACTTCTGCACGTGCCGTTGAAGGTAGATACCGTTTTCCAGCATCCATTGTAGATTTATACAGACGAAGATTACCAAAAAGGAATGGAAAAGATGTTGAGAATGAGAAGCCTATCCAGTTATCCATCCAAGATAGAAGCTCAAGATGCAACTTTTCTTCCTTAAAACCTTTTGTCCTATTGATAACCATTTGCGGCACTTACGTAACGCTCCTCTATTCTCCAAAGGTTTACAACACCAACCATTTATCAAGCTCTGGCTTGGGGCCAAATTTTGTGAACAGGTGGATATGGGGTGGTTCAGATCCTCGGTATATATCAAATGTTGATATTAACTGGGATAGTATATTACAAATTATTGAGAAACTGACAAGGAAGAAAGAATTTCAAGGGGTTGGCCTTCTAAACTTCAATAAGACTGAATCAGACCATTGGGAACAGCTTATTCCTAATGCCACACATGTTCTGCACCTTGAGTATGCTGCAAAAAATGTGACATGGGAATCCCTATACCCAGAATGGATTGATGAGGAAGAAGAGACCGAAGTTCCGATTTGTCCTTCTCTTCCAAGTCTTAGATCTCCTGGAATAAGGCTCAATCTCATAGCTGTGAAGCTTCCTCATGCCAATGGGGGGAATTGGTCTAGAGATGTTGCTCGGTTGCACTTGCAACTAGCAGCAGCTAGGCTTGCAACCTCTTTCAAAGGCAATTACCCCGTGTATATGCTTTTTGTTACCAACTTCTTTCCAATACCCAATTTGTTTACCTGCAAAGAACTTGTGGGACATGAAGGGAATGTGTGGTTATACAAACCCAACTTGAATGTTTTGAGAGAAAAACTCCACCTCCCCGTAGGATCTTGTGAACTTGCACTTCCTTTGAGGGGCAAAGAGCTGAGTTATGTGGGAAATGTTCGTAGAGAAGCATATGCAACAATTCTCCATTCAGCTCACGTTTATGTTTGTGGAGCTATTGCAGCAGCACAAAGCATCCGTATGTCTGGATCAACTAGAGACCTAGTTATACTTGTTGATGAGACAATAAGTGAGTACCACAGAAGTGGTTTAGAAGCAGCAGGGTGGAAAATTAGGACAATACAAAGGATCAGAAACCCAAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCCGTTTGTGGCAGCTTACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATCCTAAGAAATATAGATTTCCTATTTGGAATGCCAGAAATCACTGCAACTGGAAATAATGGCACTCTTTTCAACTCTGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCAAGCTCCTAATGGATCATATTAATGAGTTTGAGTCCTACAATGGAGGGGACCAGGGATACTTAAATGAAATATTCACATGGTGGCACAGGATACCAAGACACATGAATTTTTTGAAGCATTTTTGGGTTGGTGATGAGGAAGAGAAGAAGCAAATGAAGACTATGTTATTTGGTGCTGACCCTCCAATTCTCTATGTCCTTCACTATCTAGGAATGAAGCCATGGTTGTGCTTCCGGGACTATGATTGTAACTGGAACAGTGATATCTTTCACGAGTTTGCAAGTGATGTTGCTCATGAAAGGTGGTGGAAGGTACATGATGCAATGCCTGAGCTTTTGCAACAGTTTTGCATGTTGAAGTCAAAGCAGAAGGCACAGTTGGAATGGGATCGTAAGCAAGCTGAAATTGCTAACTACACAAATGGGCATTGGCAAATTAAAGTTAAAGATAAGAGGTTGAAGAAATGCATTGATAACTTGTGCTCATGGAAAAACATGTTGAAGCACTGGGGAGAGACCAATTGGACTGATGATGAGTCTTATACTCCAACACCACCTGCCATTGCCACATCATCTCTTTCTGGTTTGTGA 1926 0.4107 MGTSARAVEGRYRFPASIVDLYRRRLPKRNGKDVENEKPIQLSIQDRSSRCNFSSLKPFVLLITICGTYVTLLYSPKVYNTNHLSSSGLGPNFVNRWIWGGSDPRYISNVDINWDSILQIIEKLTRKKEFQGVGLLNFNKTESDHWEQLIPNATHVLHLEYAAKNVTWESLYPEWIDEEEETEVPICPSLPSLRSPGIRLNLIAVKLPHANGGNWSRDVARLHLQLAAARLATSFKGNYPVYMLFVTNFFPIPNLFTCKELVGHEGNVWLYKPNLNVLREKLHLPVGSCELALPLRGKELSYVGNVRREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISEYHRSGLEAAGWKIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNGTLFNSGVMVVEPSNCTFKLLMDHINEFESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNSDIFHEFASDVAHERWWKVHDAMPELLQQFCMLKSKQKAQLEWDRKQAEIANYTNGHWQIKVKDKRLKKCIDNLCSWKNMLKHWGETNWTDDESYTPTPPAIATSSLSGL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00686 641 FunFam Hexosyltransferase 306 558 - -
Pumo6g00686 641 Pfam Glycosyl transferase family 8 315 521 IPR002495 GO:0016757
Pumo6g00686 641 SUPERFAMILY Nucleotide-diphospho-sugar transferases 309 554 IPR029044 -
Pumo6g00686 641 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 306 556 IPR029044 -
Pumo6g00686 641 PANTHER GLYCOGENIN SUBFAMILY MEMBER 215 601 - -
Pumo6g00686 641 CDD GT8_Glycogenin 309 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00686 Pumo-Chr6 8607497 8613178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00686 9 641 Glycosyltransferase AT3G18660 64.043 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00686 K20890 - gmx:100783884 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00686 6 8607497 8613178 Pumo6g00686 6 8607497 8613178 ECH
Pumo10g01650 10 21702934 21710091 Pumo6g00686 6 8607497 8613178 ECH
Pumo6g00686 6 8607497 8613178 Pumo10g01650 10 21702934 21710091 PCT