Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01650 ATGAGAGGAACAATGGGTACTTCTCCTCATGCCGTTGAAGCTCGACACCGTTTGCCTGCATCCATTGAAGATTTATACAAACGAAGACTGCCAAGAAGCAAAGCAAAAGATGCAGAGAAACCTTTCCACTTATCAGTCCAAGATAGGAGCTCAAGATGCAAGTTGTCTTTCTTAAAACTTATCCTATTGATAACCGTATGCGGCACTTTTGTAACGCTCCTATACTCTCCGGAGGTTTACAATACCAACCATTTATCAAGCTCTGGCTCTCGGTGGATATGGGGTGGCTCAGATCCTCGTTACATGTCCAATGTAGACACTGACTGGGATGACATATTGAAAATTACGGAGAAGCTGACAGGGGAAGATGAACTTCAAGGAATTGGGCTTGTAAATTTCAACATGACTGAACTAGCACATTGGGAGCATCTTATTCCTGAGGCAACACATGTTGTTCTGCCTCTGGAGTATGCTGCAAGAAACATGACATGGGAGTCCTTGTATCCAGAATGGATTGATGAGGAAGAGGAAACTGAAGTTCCTGTTTGTCCTTCTCTACCAAGTCTAAGATCCCCTGGCATAAGACTTAACCTCATTGCTGTGAAGCTTCCTTGTAGGAATGGAGGGAATTGGTCTAGAGATGTTGCTCGTCTGCACCTTCAGCTTGCAGCTGCTGCCCTTGCAACATCTTTCAAGGGCAACTACCCCGTTTATGTGCTCTTCAATACCAACTGCTTTCCAATACCAAATTTGTTCACATGTAAAGAACTAGTTGCACGTGAAGGGAATGTGTGGTTGTACAAACCAAACTTGAGTGTTTTGAGAGAAAAGGTCCAGCTTCCTGTAGGGTCTTGTGAACTTGCACTTCCTATGAGAGGCAAAGAGCTGGTTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTTTATGTTTGTGGAGCTATAGCTGTGGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACCTTGTAATACTTGTTGATGAGACAATCAGCAGCTATCACAGAAGTGGTTTGGAAGCAGCAGGTTGGAAGGTTAGAACAATACAAAGGATCAGAAACCCCAAAGCTGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGCTATGGCAGTTGACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTATTTGGAATGCCAGAAATCACTGCCACTGGAAACAATGCCACTCTCTTTAACTCAGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGGATCATATCAATGAGATTGAGTCCTACAATGGAGGGGACCAGGGATATTTGAACGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGCGACGAGGAAGAGAAGAAACAAATGAAAACTATGTTGTTTGGTGCGGAACCTCCAATTTTGTATGTCCTTCACTATCTAGGTGTGAAGCCGTGGTTATGCTTCAGGGACTATGATTGCAACTGGAATGCTGATATTTTCCATGAATTTGCAAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAACTTTTGCATCAGTTTTGCCTGTTGAAGTCAAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAAATAGCAAACTACACAGATGGGCATTGGCAAATTAAAGTTAAAGATAGGCGCTTGAAGAAATGTATAGATAATTTGTGCAACTGGAAAAGCATGTTGCGGCACTGGGGAGAGACAAATTGGACAGATGATGAGTTTAATACTCCAACACCACCTACCATTACCACAGCATCTCTTTCTGCTTTATGA 1914 0.43 MRGTMGTSPHAVEARHRLPASIEDLYKRRLPRSKAKDAEKPFHLSVQDRSSRCKLSFLKLILLITVCGTFVTLLYSPEVYNTNHLSSSGSRWIWGGSDPRYMSNVDTDWDDILKITEKLTGEDELQGIGLVNFNMTELAHWEHLIPEATHVVLPLEYAARNMTWESLYPEWIDEEEETEVPVCPSLPSLRSPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAALATSFKGNYPVYVLFNTNCFPIPNLFTCKELVAREGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELVYNGNAPREAYATILHSAHVYVCGAIAVAQSIRMSGSTRDLVILVDETISSYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLHQFCLLKSKQKAQLEWDRRQAEIANYTDGHWQIKVKDRRLKKCIDNLCNWKSMLRHWGETNWTDDEFNTPTPPTITTASLSAL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01650 637 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 303 552 IPR029044 -
Pumo10g01650 637 FunFam Hexosyltransferase 302 554 - -
Pumo10g01650 637 SUPERFAMILY Nucleotide-diphospho-sugar transferases 304 551 IPR029044 -
Pumo10g01650 637 Pfam Glycosyl transferase family 8 311 517 IPR002495 GO:0016757
Pumo10g01650 637 CDD GT8_Glycogenin 305 550 - -
Pumo10g01650 637 PANTHER GLYCOGENIN SUBFAMILY MEMBER 210 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01650 Pumo-Chr10 21702934 21710091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01650 13 637 Glycosyltransferase AT3G18660 66.978 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01650 K20890 - gmx:100809361 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01650 10 21702934 21710091 Pumo10g01650 10 21702934 21710091 ECH
Pumo10g01650 10 21702934 21710091 Pumo6g00686 6 8607497 8613178 ECH
Pumo6g00686 6 8607497 8613178 Pumo10g01650 10 21702934 21710091 PCT