Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00611 ATGGCAGCTCTGGTCAATGCTGCAACAAGTGAGAAACTGGTTGAAACTGATTGGATGAAAAATATTGAAATCTGTGAGTTAGTCGCTCATGATCAAAGGCAAGCTAAAGATGTTGTTAAAGCTATAAAAAAGAGGCTGGGTAACAAGAACCCTAATATTCAACTTTATGCAGTCGCGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCGTGTTCACCAGCAGGTGATTGATACAGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCCCAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAGAGGGATCATGTGACCCAATCAAATCATCCTTGTTCACAACTTAATGGGATTAACAATGTACCAACCAGGGAGCAGGCCCCGCCTAGACATCAGCAAGTAGAGTCCCAAACTGTTCCTGAATCGAGCATTATTCAAAAGGCTAGTAATGCATTAGAAGTTTTAAAAGAAGTCCTTGATGCTATTGATGCCCAACATCCTAAGGCAGCAAGAGATGAATTCACCCTTGACCTTGTTGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATTGAATTAAACGAGCAACTTCAGAAAGTTCTTGCAAGACATGATAGCCTTCTTTCGGGTAGACCCACAACAATAGCTAATCACTTGAACTGTGAAGAAGCAGAGGAGGAAGAAGAAGAACCAGAACAGTTATTCCGGAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCAGAAGATGAAGAAAGAGAACCTGAGTTCCCTCACTGGGGTTTGCTTGAAGAGAGACTCAACCGTCCATTAATAAGACCGCTATCTCTGGAGCCATCTCGAGAAGCTAATACTTATCCTGCTCCTGCTGTGATTCCTCCTCACATGGCAATTCCACCCCCGCCTTCAAAGCACATTGAGAGGGAGAGATATTTTCAGGAAAATAAAAAGGATGGTGCTACTTTGGCTGGCCACTTGAGAGGCCTCTCCTTGCATAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1200 0.4283 MAALVNAATSEKLVETDWMKNIEICELVAHDQRQAKDVVKAIKKRLGNKNPNIQLYAVALLEMLMNNIGERVHQQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDHVTQSNHPCSQLNGINNVPTREQAPPRHQQVESQTVPESSIIQKASNALEVLKEVLDAIDAQHPKAARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDSLLSGRPTTIANHLNCEEAEEEEEEPEQLFRRLRKGKACARPEDEEREPEFPHWGLLEERLNRPLIRPLSLEPSREANTYPAPAVIPPHMAIPPPPSKHIERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00611 399 MobiDBLite consensus disorder prediction 363 399 - -
Pumo6g00611 399 Pfam VHS domain 3 110 IPR002014 GO:0035091|GO:0043130
Pumo6g00611 399 Coils Coil 182 202 - -
Pumo6g00611 399 Pfam GAT domain 187 262 IPR004152 GO:0035091|GO:0043130
Pumo6g00611 399 Gene3D - 1 135 IPR008942 -
Pumo6g00611 399 ProSiteProfiles VHS domain profile. 8 137 IPR002014 GO:0035091|GO:0043130
Pumo6g00611 399 SUPERFAMILY ENTH/VHS domain 3 139 IPR008942 -
Pumo6g00611 399 ProSiteProfiles GAT domain profile. 173 261 IPR004152 GO:0035091|GO:0043130
Pumo6g00611 399 MobiDBLite consensus disorder prediction 382 399 - -
Pumo6g00611 399 CDD GAT_GGA-like_plant 181 259 - -
Pumo6g00611 399 FunFam TOM1-like protein 2 1 146 - -
Pumo6g00611 399 SUPERFAMILY GAT-like domain 179 263 - -
Pumo6g00611 399 PANTHER TOM1-LIKE PROTEIN 2 297 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pumo6g00611 399 CDD VHS 1 129 - -
Pumo6g00611 399 SMART VHS_2 1 133 IPR002014 GO:0035091|GO:0043130
Pumo6g00611 399 Gene3D - 171 269 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00611 Pumo-Chr6 7707647 7714327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00611 - - gmx:100802949 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00611 6 7707647 7714327 Pumo6g00611 6 7707647 7714327 ECH
Pumo6g00611 6 7707647 7714327 Pumo10g01775 10 23385889 23391105 PCT