Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01775 ATGGCAGCTGAGCTAGTCAATGGTGCAACAAGCGAAAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATTTGTGAGCTAGTTGCTCATGATAAAAGGCAAGCAAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACCCCAATACTCAACTCTATGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAAGTGATTGATACTGGAATTATTCCGATTCTAGTAAAAATTGTAAAGAAAAAGTCTGATTTGCCTGTGAGGGAGCGGATATTTCTCCTACTAGATGCCACACAAACATCCCATGGTGGTGCATCTGGAAAGTTTCCGCAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGAGTGCAGTTTTCTCAAAGGGATCAAGTGGTTCAATCAAATAATCCTAGTTCCCATCCTAGTAGAACTAGTAATGTACCAAACAGGGAGCAGGCCTCACCTAGACATGAAGCGGTTGCTCAGCCAGCAGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTTGATGCTGTTGATGCTCAAGATCCTCAGGGAGCAAGGGATGAATTCACCCTTGACCTTGTAGAACAATGTTCTTTTCAAAAACAAAGGGTTATGCATCTTGTGATGGCTTCTCGAGATGAAAGGATAGTTTCTCGAGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGTGACAACAACCGCGACCGCCACTCGATTTGACCATGAAGAAGCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGCAAGGGAAAGGCTTGTGCAAGGCCTGAAGATGAGGAGACTGAAACCGACATCCCTCGCTTGGGTTTGCTTGGAGAGAGACTCAATCGTCCACTAATACGGCCACTCTCGATAGAGCCGCCATCTCGAGAAGCCGATACTCGATCTCCACCTGCTGTGATCCCACCTCCACGGCCGAAGCAGAACGGGGAGGTTCCTCATCATGTGGCAATTCCACCACCACCTGCAAAGCACATTGAGAGGGAGAGGTTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGCCTCTCCTTACATAGTCGTAATGGCAGCAGCTCTCACAGTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1257 0.4463 MAAELVNGATSEKLAETDWTKNIEICELVAHDKRQARDVVKAIKKRLGSKHPNTQLYAVMLLEMLMNNIGEHIHEQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSHGGASGKFPQYYNAYYDLVSAGVQFSQRDQVVQSNNPSSHPSRTSNVPNREQASPRHEAVAQPAESQTVPESSIIQKASNALEVLKEVLDAVDAQDPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLLAGRVTTTATATRFDHEEAEEEEEPEQLVRRLRKGKACARPEDEETETDIPRLGLLGERLNRPLIRPLSIEPPSREADTRSPPAVIPPPRPKQNGEVPHHVAIPPPPAKHIERERFFQENKDGSNLSGHMRGLSLHSRNGSSSHSHSGSFDFSD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01775 418 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Pumo10g01775 418 MobiDBLite consensus disorder prediction 346 369 - -
Pumo10g01775 418 Gene3D - 176 275 IPR038425 -
Pumo10g01775 418 MobiDBLite consensus disorder prediction 142 164 - -
Pumo10g01775 418 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Pumo10g01775 418 Pfam VHS domain 5 107 IPR002014 GO:0035091|GO:0043130
Pumo10g01775 418 Coils Coil 187 207 - -
Pumo10g01775 418 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Pumo10g01775 418 Gene3D - 2 136 IPR008942 -
Pumo10g01775 418 SUPERFAMILY GAT-like domain 143 268 - -
Pumo10g01775 418 SUPERFAMILY ENTH/VHS domain 4 137 IPR008942 -
Pumo10g01775 418 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Pumo10g01775 418 MobiDBLite consensus disorder prediction 142 184 - -
Pumo10g01775 418 CDD GAT_GGA-like_plant 186 264 - -
Pumo10g01775 418 CDD VHS 2 130 - -
Pumo10g01775 418 MobiDBLite consensus disorder prediction 330 418 - -
Pumo10g01775 418 MobiDBLite consensus disorder prediction 385 418 - -
Pumo10g01775 418 PANTHER TOM1-LIKE PROTEIN 1 402 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pumo10g01775 418 MobiDBLite consensus disorder prediction 370 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01775 Pumo-Chr10 23385889 23391105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01775 - - gmx:100785131 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01775 10 23385889 23391105 Pumo10g01775 10 23385889 23391105 ECH
Pumo6g00611 6 7707647 7714327 Pumo10g01775 10 23385889 23391105 PCT