Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00580 ATGGGTGTGTGGAAATTGGGTTTTTTGGGGCTTCTTTGTGCAAGTTTTCTCTTTGCAATTGGAGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCAAGATGCCTCAACCATATGTTTGCTGCCGAAATCTTTATGCACCGATTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTGTACGCCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAATCACCACGAATGATGAGAAGTGCTATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTACACTGCTACGGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGCTTGAAAGAGGGCTCAATTACCATTCCTCCATATGCTCCACCACAGAAAATGCATACCCACCTAATTCCTGACGAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTCTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGCGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCGCTGTTTGACATCTCCACTGAGCATCCAACCACGTACTACGAGGACATGCAACGAGCCGTGTTTTGTCTATGCCCACTTGGATGGGCTCCTTGGAGCCCAAGATTGGTAGAAGCCGTGGTATTTGGTTGCATCCCTGTTATTATTGCAGATGACATTGTTCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGGGTGTTTGTTGATGAGGAGGATGTTCCAAAGTTGGATACAATACTCACATCTATCCCACCAGAAGTCATATTAAGGAAACAGAGATTACTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCCGGAGACGCGTTCCATCAAGTTTTAAATGGACTTGCGCGTAAGCTGCCGCATGACAGCACTGTGTTCTTGAAATCAGGGGAGAAGGTCTTGAATTGGACTGCTGGACCTGTGGGTGACCTTAAACCTTGGTAA 1251 0.4564 MGVWKLGFLGLLCASFLFAIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYATCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILTLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDETPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDSTVFLKSGEKVLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00580 416 Pfam Exostosin family 49 344 IPR040911 -
Pumo6g00580 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00580 Pumo-Chr6 7392485 7395797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00580 K20870 - gmx:100812747 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00580 6 7392485 7395797 Pumo6g00580 6 7392485 7395797 ECH
Pumo6g00580 6 7392485 7395797 Pumo10g01777 10 23404715 23407146 PCT
Pumo10g01813 10 23793766 23797579 Pumo6g00580 6 7392485 7395797 PCT