Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01777 ATGAGAACTGCAAACAAATGCTTCTCTTCGTTCACTTGTTGGCCTTCTTACTTTGTGGCTCTTTTCTTCATAACTTCAATAGTTCTTGTTTCTTGTTGGAGTCTTCTCCCTCCAAATTTCTCTTCATCTCATGCTTCTTGGAGTTGGAAGGGAGAACCAACTTCCTCTAATTTGGATAAAGAAAAGAAAAATGATGAAGGAGAGGCTCCATCTCCAACTGCATTTGACTTAGATCATCATGGTCCTCATCGAGAATTCAATGAGGGTGATGAAAAGCTTTACACCGAGTTTAAGCATAAAGGTACGGATAAAGGGAATAACCTCAGAGATCACAAGTACAGCAAGTTACGAAGAATTGAAGCAAGATTGGCTAAAGCAAGGTATTCCATCAGAGAAGCTAGCAAAATTCGAAATTTGACATCAACCCTTCATGATCCAGACTATGTTCCTCATGGTCCAATTTACAGAAACGCCAATGCTTTTCATAGGAGTTACCTAGAGATGGAAAAGGTGTTCAAGATATTTGTGTATGAAGAAGGGGAGCCACCGCTGTTCCACAATGGTCTAAGCAAAGACATATATGCCACAGAGGGAAGATTCATACATGAAATGGAAAAGGGGAGGTACTATCGTACTTATGATCCAGATGAAGCTTTTGTGTATTATCTGCCCTTTAGTGTGGTTATGTTGGTCGAATATGTATACGATCGTGGCTCTAATTATAATCTTGATCCCGTTGGCCTTGTTGTAAAAGACTACATACAGATTATATCCCATAAACATCCCTTCTGGAATCGATCCCTTGGCCATGATCATTTCATGCTCTCTTGCCACGATTGGGGTCCGATTGTATCTAGTTATGTGGACCACTTGTACAACAATACCATAAGGGTTCTTTGCAACGCAAATACATCTGAAGGATTCAAGCCAGCAAAGGATGTGTCATTTCCTGAGATTAATCTTATAAGGGGGGAAGTCACAGGTCTTGTAGGAGGGTATCCCCCATCTCAAAGGACCATCCTTGCTTTCTTTGCAGGTCACTTGCATGGCCATATAAGATACCTACTCTTAAATACATGGAAAAACAAAGACCAAGATGTGCAAGTCTATGAGGAACTTCCTCAGGGAATCTCTTACCACACAAAGCTTAGAAGCAGCAAGTTTTGCCTGTGCCCAAGTGGCTATGAAGTAGCTAGTCCCAGGATAGTGGAAGCAATATTTGCAGAATGTGTGCCAGTTCTGATTTCTGATAGCTATGTTCCACCCTTCAGTGATGTTTTGAATTGGAATTCATTTTCAGTTCAAGTGGATGTAAAGGAAATTCCCAATATCAAAAAGATACTCATGGGCATTTCAGAAAGGCAGTACTTGAGGATGCAAAGGAGGGTGAAACAAGTGCAAAGGCATTTTGTGCCTAATGAACCACCAAAGAGGTATGATATGTTCCATATGACTGTCCATTCCATTTGGCTCAGGAGGTTGAATATCCATATTCAAGATCAGTAA 1506 0.407 MRTANKCFSSFTCWPSYFVALFFITSIVLVSCWSLLPPNFSSSHASWSWKGEPTSSNLDKEKKNDEGEAPSPTAFDLDHHGPHREFNEGDEKLYTEFKHKGTDKGNNLRDHKYSKLRRIEARLAKARYSIREASKIRNLTSTLHDPDYVPHGPIYRNANAFHRSYLEMEKVFKIFVYEEGEPPLFHNGLSKDIYATEGRFIHEMEKGRYYRTYDPDEAFVYYLPFSVVMLVEYVYDRGSNYNLDPVGLVVKDYIQIISHKHPFWNRSLGHDHFMLSCHDWGPIVSSYVDHLYNNTIRVLCNANTSEGFKPAKDVSFPEINLIRGEVTGLVGGYPPSQRTILAFFAGHLHGHIRYLLLNTWKNKDQDVQVYEELPQGISYHTKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDVLNWNSFSVQVDVKEIPNIKKILMGISERQYLRMQRRVKQVQRHFVPNEPPKRYDMFHMTVHSIWLRRLNIHIQDQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01777 501 Pfam Exostosin family 169 449 IPR040911 -
Pumo10g01777 501 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 36 489 IPR004263 GO:0006486|GO:0016757
Pumo10g01777 501 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Pumo10g01777 501 MobiDBLite consensus disorder prediction 42 83 - -
Pumo10g01777 501 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01777 Pumo-Chr10 23404715 23407146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01777 - - gmx:112997610 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01777 10 23404715 23407146 Pumo10g01777 10 23404715 23407146 ECH
Pumo6g00580 6 7392485 7395797 Pumo10g01777 10 23404715 23407146 PCT