Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00551 ATGACCATGCATCGCGAGACTTGGGCTTTTGTCTTCGGCCTTTTGGGCAACATCATCTCCTTTGGAGTGTTCCTTGCTCCATTGCCAACCTTTTACCAAATCTACAAGAAGAAATCCACTGAAGGGTACCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTGCAATGCTTTGGATTTACTATGCTTTCGTCAAAAGGGAAGCTGCCCTCCTCCTCATTACCATTAACACGTTTGGAATTGTTGTGGAGTCAATTTACCTTGCAATCTTCCTATTTTATGCCCCAAGGAAGCCTAGGCTTACAACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGGTTCGGAGCCATGCTTCTATCAACTCTCTACCTGTCAAAGGGAGCAAAGCGTCTTGCTATCATAGGATGGATTTGCCTTGTTTTCAACATCAGTGTCTTTGCTGCGCCTCTCTTCATTATTAGGCGAGTCATAAAGACGAGGAGCGTGGAATACATGCCCTTTACTTTGTCCATGTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTATTACGTTGCTCTCCCAAACACACTCGGGTTTCTCTTCGGCATAATTCAGATGGTGATGTATTTGATGTACAGAAACGCCACACCAGTGGCACTAGAGGAGCCAGTGAAGGCTCAAGAATTGAATGGTGGCCACATCATTGACGTTGTGAAGATGGGAACAATGGAACCGAATCATGGAGCTACTGGTGGTGCTGTTGGCAAAGTCTGA 777 0.4505 MTMHRETWAFVFGLLGNIISFGVFLAPLPTFYQIYKKKSTEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLAIFLFYAPRKPRLTTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLMYRNATPVALEEPVKAQELNGGHIIDVVKMGTMEPNHGATGGAVGKV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00551 258 Gene3D - 129 220 - -
Pumo6g00551 258 Gene3D - 11 97 - -
Pumo6g00551 258 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Pumo6g00551 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Pumo6g00551 258 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Pumo6g00551 258 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Pumo6g00551 258 FunFam Bidirectional sugar transporter SWEET 130 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00551 Pumo-Chr6 6931780 6934685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00551 1 248 Miscellaneous Gene Families AT5G50790 54.217 1.67e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00551 K15382 - gmx:100810946 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00551 6 6931780 6934685 Pumo6g00551 6 6931780 6934685 ECH
Pumo6g00551 6 6931780 6934685 Pumo10g01850 10 24391381 24393704 PCT