Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01850 ATGGTGTTCCTTGCTCCATTACCAACTTTTTACCAAATCTACAAGAAGAAATCTACAGAAGGGTTTCAATCACTACCTTATGTTGTTGCACTGTTCAGTTCAATGCTCTGGATTTATTACGCACTTGTCAAAAAGGATGCTAGCCTCCTTCTCATTACCATTAACTCTTTGGGATGTGTGATAGAGACAATTTACCTTGCAATCTTCCTAGTTTACGCCCCAAGTAAAACCAGGCTTTCGACCATCAAGCTTCTTCTCTTGTTGAATGGCTTTGGGTTCGGAGCGATGCTTCTTTCAACCCTCTACCTTACAACAGGATCCAAACGTCTCTCTGTGATAGGATGGATTTGCCTTGTTTTCAACATAAGCGTTTTTGCTGCCCCTCTTTGCATTATGAAACGTGTCATAAAGACAAAGAGTGTGGAATTCATGCCTTTCACTTTGTCCTTCTTTTTGACCTTAAATGCTGTCATGTGGTTCTTCTATGGCCTTCTCCTTAAGGACTACTACATCGCTTTCCCAAATACGCTTGGGTTTCTATTCGGCATAATTCAGATGGTACTGTATTTGATTTATAGAAACGCCAAGACACAGGCATCGGAGGAGCCAACGAAGTTACAGGAACTAAATGGTCATATTATTGACGTTGTGAAGTTGAGCACAATGGTACCCTATGAGCCTAATCATGTAACAAAAAGTGGTGCTGTGACTGAGATAGCTATTGATCAGAATCCAAATGAAAAAGAAACAGCAAAGGGAAACCTGAAGAACACCATGGATTCCGCTAGCAATGTGTGA 798 0.4098 MVFLAPLPTFYQIYKKKSTEGFQSLPYVVALFSSMLWIYYALVKKDASLLLITINSLGCVIETIYLAIFLVYAPSKTRLSTIKLLLLLNGFGFGAMLLSTLYLTTGSKRLSVIGWICLVFNISVFAAPLCIMKRVIKTKSVEFMPFTLSFFLTLNAVMWFFYGLLLKDYYIAFPNTLGFLFGIIQMVLYLIYRNAKTQASEEPTKLQELNGHIIDVVKLSTMVPYEPNHVTKSGAVTEIAIDQNPNEKETAKGNLKNTMDSASNV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01850 265 Gene3D - 1 77 - -
Pumo10g01850 265 PANTHER RAG1-ACTIVATING PROTEIN 1 1 205 IPR047664 -
Pumo10g01850 265 Pfam Sugar efflux transporter for intercellular exchange 112 196 IPR004316 GO:0016020
Pumo10g01850 265 Pfam Sugar efflux transporter for intercellular exchange 1 76 IPR004316 GO:0016020
Pumo10g01850 265 Gene3D - 108 207 - -
Pumo10g01850 265 FunFam Bidirectional sugar transporter SWEET 109 201 - -
Pumo10g01850 265 FunFam Bidirectional sugar transporter SWEET 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01850 Pumo-Chr10 24391381 24393704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01850 2 261 Miscellaneous Gene Families AT5G50790 52.471 1.84e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01850 K15382 - gmx:100794434 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00551 6 6931780 6934685 Pumo10g01850 10 24391381 24393704 PCT