Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00407 ATGCCACCACAAACCATTCTGGTTACCGGCGGAGCCGGTTACATAGGTAGCCACACCGTCCTTCAGCTTCTCCTCGGCGGTTACCATGTCTACATCGTCGACAACTTCGACAATTCTTCCGAAACCGCCATCCAGAGAGTCAAGGAACTCGCCGGAGAATTCGCTAATAACCTTTCCTTTTTAAAGATAGACTTGCGGGACAGAGCTGGCCTCGAGAAAATTTTTTCAACCACAAGGTTTGATGCTGTCATACATTTTGCTGGGCTTAAAGCAGTGGGTGAAAGTGTGGAGAAACCACTGCTCTACTTTGACAACAACTTGATTGGGACAATCGTTCTATTTGAAGTCATGGCTGCCCACGGATGCAAGAAGATTGTGTTCTCATCTTCAGCAACCGTATATGGCTGGCCAAAGGAGGTTCCATGTACTGAAGAGTTCCCTTTGTCGGCAGCAAACCCATATGGACGAACCAAGCTTATCATCGAAGAAATTTGTCGTGATATCTACCGTGCAGATTCAAATTGGAAAATTATACTGTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTCATATTGGTGAGGATCCTCGTGGAATTCCAAACAACCTCATGCCCTTTGTTCAACAAGTGGCAGTTGGCAGACGCCCTGCATTGACAGTTTTTGGAAAAGATTATAAAACAAGTGACGGCACTGGAGTTCGTGATTACATTCATGTTCTTGATTTAGCAGATGGGCACATTGCTGCATTGCGTAAACTGGATGATCCTAAAATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTAACCGCTTTTGAAAAGGCCTCTGGAAAGAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGAAGTTGTTTATGCATCAACAGAGAAAGCGGAAAAAGAACTTAATTGGAAGGCTAAATATGGCATCGATGACATGTGCCGCGATCAATGGAATTGGGCTAGCAAAAATCCTTATGGCTATGGTGGATCTGAAAATTCCTCCAAGTGA 1053 0.4473 MPPQTILVTGGAGYIGSHTVLQLLLGGYHVYIVDNFDNSSETAIQRVKELAGEFANNLSFLKIDLRDRAGLEKIFSTTRFDAVIHFAGLKAVGESVEKPLLYFDNNLIGTIVLFEVMAAHGCKKIVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRADSNWKIILLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGKDYKTSDGTGVRDYIHVLDLADGHIAALRKLDDPKIGCEVYNLGTGKGTSVLEMVTAFEKASGKKIPLAMAGRRPGDAEVVYASTEKAEKELNWKAKYGIDDMCRDQWNWASKNPYGYGGSENSSK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00407 350 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Pumo6g00407 350 Gene3D - 194 335 - -
Pumo6g00407 350 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Pumo6g00407 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 343 - -
Pumo6g00407 350 FunFam UDP-glucose 4-epimerase 6 199 - -
Pumo6g00407 350 NCBIfam UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Pumo6g00407 350 FunFam UDP-glucose 4-epimerase 4 278 346 - -
Pumo6g00407 350 Gene3D - 6 275 - -
Pumo6g00407 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00407 Pumo-Chr6 5171036 5175210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00407 5 319 Miscellaneous Gene Families AT4G00110 28.182 8.19e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00407 K01784 - gmx:100812565 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02408 8 61330220 61334959 Pumo6g00407 6 5171036 5175210 PCT