Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03823 ATGGAGAGCGTGGCATCCCAAATAATAACATCTTCAAGCAACAACAATGGCAGTGGAAGCACTACTCCTAGCAGGTACGAGAACCAAAAGCGGCGAGACTGGAACACGTTCTGCCAGTACCTGCGGAACCACCGGCCACCGCTATCGGTGGCGCTGTGCAGCGGGGTGCACGTGCTGGAATTCCTGCACTACCTGGACCAGTTCGGGAAGACGAAAGTGCACAACCCGACATGCCCATTCTTCGGGCTGCCGAACCCTCCGGCGCCCTGCCCCTGCCCGCTCCGGCAGGCCTGGGGCAGCCTCGACGCCCTCATCGGCCGCCTCCGCGCCGCCTACGAAGAGAACGGCGGCACGCCCGAAACCAACCCCTTCGGCGCCCGCGCCGTCAGGCTCTACTTGCATGATGTTCGCGATTTTCAGGCCAAGGCCAGAGGAGTCAGCTACGAGAAGAAGAGGAAGAGGCCTAAGCAAAACATCGCTAATGCACCAACTGTTACCACTTCCCCTAATGCCACTGCCACTTAA 525 0.6 MESVASQIITSSSNNNGSGSTTPSRYENQKRRDWNTFCQYLRNHRPPLSVALCSGVHVLEFLHYLDQFGKTKVHNPTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFGARAVRLYLHDVRDFQAKARGVSYEKKRKRPKQNIANAPTVTTSPNATAT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03823 174 ProSiteProfiles ALOG domain profile. 25 152 IPR006936 -
Pumo5g03823 174 MobiDBLite consensus disorder prediction 144 174 - -
Pumo5g03823 174 PANTHER PROTEIN G1-LIKE2 14 160 IPR040222 -
Pumo5g03823 174 MobiDBLite consensus disorder prediction 1 27 - -
Pumo5g03823 174 MobiDBLite consensus disorder prediction 1 25 - -
Pumo5g03823 174 Pfam ALOG domain 21 138 IPR006936 -
Pumo5g03823 174 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03823 Pumo-Chr5 88180195 88180719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03823 - - gmx:100803965 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02868 5 75909160 75911319 Pumo5g03823 5 88180195 88180719 ECH
Pumo5g03823 5 88180195 88180719 Pumo5g03823 5 88180195 88180719 ECH
Pumo5g03823 5 88180195 88180719 Pumo3g02461 3 37429014 37431039 PCT