Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02868 ATGGATTCAAATATTCAAGACTTTATAGACACATGTAACTCTGACAACACCTGCAACCTCATCACCAATAGCACCATCACCACCAACTTAACCACCAGTGCTGCCTCTTCCTCTCCTGCTTCCACCTCCATCACCAGCAGCAGCCGCTACGAGAACCAGAAGCGCCGTGACTGGAACACCTTCGGCCAATACCTCAAGAATCACCGTCCCCCTCTCTCCCTCTCCAGGTGCAGCGGTGCACACGTCCTTGAATTTCTAAGGTACCTGGATCAATTTGGGAAGACCAAAGTGCACACACCGATCTGCCCCTTTTACGGGCACCCGAACCCTCCAGCGCCATGTCCATGTCCTCTTAGGCAAGCTTGGGGGAGCCTTGACGCACTGATAGGGCGTTTGCGTGCAGCTTTTGAGGAAAATGGAGGGAAGCCTGAGGCAAACCCTTTTGGAGCTCGAGCTGTGAGACTCTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCAAGAGGGATTAGTTATGAGAAGAAGAAACGGAAGCGTCCACCACCTCAGCAACAACCCATGCCGATACCCCATCACCCTCTTCCTCCTCCAGGTGCAAGTGCAACTCATTAG 612 0.5278 MDSNIQDFIDTCNSDNTCNLITNSTITTNLTTSAASSSPASTSITSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQQQPMPIPHHPLPPPGASATH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02868 203 PANTHER PROTEIN G1-LIKE2 31 183 IPR040222 -
Pumo5g02868 203 MobiDBLite consensus disorder prediction 32 49 - -
Pumo5g02868 203 MobiDBLite consensus disorder prediction 182 197 - -
Pumo5g02868 203 MobiDBLite consensus disorder prediction 167 203 - -
Pumo5g02868 203 Pfam ALOG domain 45 162 IPR006936 -
Pumo5g02868 203 ProSiteProfiles ALOG domain profile. 49 176 IPR006936 -
Pumo5g02868 203 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02868 Pumo-Chr5 75909160 75911319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02868 - - gmx:100527164 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02868 5 75909160 75911319 Pumo5g02868 5 75909160 75911319 ECH
Pumo5g02868 5 75909160 75911319 Pumo5g03823 5 88180195 88180719 ECH
Pumo5g02868 5 75909160 75911319 Pumo3g03626 3 76850683 76851609 PCT
Pumo3g02461 3 37429014 37431039 Pumo5g02868 5 75909160 75911319 PCT