Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03594 ATGAGTGAAGCAGCACGGCGGGTCCTGGTGGCCGTGGACGAAGGCGAGGAGAGCATGCACGCTCTTTCTTGGAGCCTGAAGAACGTAATTTTCCAAAATTCCAGAGATACCCTTATCCTTCTATACGTGAAGCCCCCTCATGCCGTTTATACCCCCTTAGATTCCACAGGCAGGATAGATGATCCTGAAACTCCAGGATATTTGTTTTCGTCGGACATAAGCGCAGCCATCGAGAAGTATAGCAAAGAAGTGGCAGATTGCGTGTTAGAGAAAGCCAAGAAATTGTGTAAAGATCTCCAAAACGTCAAGGTGGAGACGCTGGTAGAAAGTGGAGACCCAAGGGACGTGATCTGTGAGATGTCTCAAAAGTTGGGTGCTGACTTGCTAGTCATGGGTAGCCACGGCTATGGAGTCGTAAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCTCCCAGAACGTGAAGTGCCCAGTTTTGATAGTCAAGAGGCCAAAACCATCTGCCAGTGCTGGAAAATGA 522 0.4885 MSEAARRVLVAVDEGEESMHALSWSLKNVIFQNSRDTLILLYVKPPHAVYTPLDSTGRIDDPETPGYLFSSDISAAIEKYSKEVADCVLEKAKKLCKDLQNVKVETLVESGDPRDVICEMSQKLGADLLVMGSHGYGVVKRAFLGSVSNYCSQNVKCPVLIVKRPKPSASAGK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03594 173 CDD USP_Like 7 162 - -
Pumo5g03594 173 Pfam Universal stress protein family 6 163 IPR006016 -
Pumo5g03594 173 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 164 - -
Pumo5g03594 173 Gene3D HUPs 1 172 IPR014729 -
Pumo5g03594 173 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 165 - -
Pumo5g03594 173 PRINTS Universal stress protein signature 5 23 IPR006015 -
Pumo5g03594 173 PRINTS Universal stress protein signature 141 163 IPR006015 -
Pumo5g03594 173 PRINTS Universal stress protein signature 123 135 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03594 Pumo-Chr5 85425912 85427274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03594 - - gmx:100527623 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03594 5 85425912 85427274 Pumo3g02182 3 33569510 33575998 ECH
Pumo5g03594 5 85425912 85427274 Pumo5g03594 5 85425912 85427274 ECH
Pumo5g03594 5 85425912 85427274 Pumo3g02026 3 31698213 31699470 PCT