Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02182 ATGGAAAAGAAAGAGCGAAAGATTATGGTGGCAGTGGATGAGAGCCAAGAGAGCATGTATGCACTCTCCTGGTGCATTACCAATCTCATTTCCGACACCAACAAGCTTGTTCTGCTTTATGTTAGGCCACCTTCTGCTTTCTACTCCTTGGATGCCGCAGGGTATATCTTTTCCACTGATGTTGTTGATGCTATGGAAAAGTACAGTATGCACTTAGCTTATTCAGTCATGGAAAGAGCTCAAGATATTTGCAGAAACTTGAACGCTATTAATATCAATATGGAGAGGGTAGTTGGTGTAGGAGATGCCAAGAATGTAATATGCACTGCAGTGAAGAAACTAGAGGCTGACACCTTGGTCATGGGAAGTCATGGCTATGGATTCTTTAAGAGGGCACTCCTTGGAAGTGTGAGTGATCACTGTGCCAAACATGCAAAGTGTCCGGTTGTAATCGTGAAGCAGCCGTAA 468 0.438 MEKKERKIMVAVDESQESMYALSWCITNLISDTNKLVLLYVRPPSAFYSLDAAGYIFSTDVVDAMEKYSMHLAYSVMERAQDICRNLNAININMERVVGVGDAKNVICTAVKKLEADTLVMGSHGYGFFKRALLGSVSDHCAKHAKCPVVIVKQP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02182 155 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 154 - -
Pumo3g02182 155 Gene3D HUPs 1 155 IPR014729 -
Pumo3g02182 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 154 - -
Pumo3g02182 155 CDD USP_Like 7 152 - -
Pumo3g02182 155 PRINTS Universal stress protein signature 113 125 IPR006015 -
Pumo3g02182 155 PRINTS Universal stress protein signature 131 153 IPR006015 -
Pumo3g02182 155 PRINTS Universal stress protein signature 5 23 IPR006015 -
Pumo3g02182 155 Pfam Universal stress protein family 6 153 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02182 Pumo-Chr3 33569510 33575998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02182 2 123 Receptor kinase-like Gene Family AT5G35380 30.645 6.97e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02182 - - gmx:100306535 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03594 5 85425912 85427274 Pumo3g02182 3 33569510 33575998 ECH
Pumo3g02182 3 33569510 33575998 Pumo3g02182 3 33569510 33575998 ECH