Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03585 ATGTCTCTTATAGCAGAAGATGTGAAGACAAGATCAGAGGTGTACCATGGAGATGAAATGTGCCAAGTGAAGTCCAAGGAGCTTCTCAAGGAAATCGCCCTCCCCAACGGCCTCTTGCCCTTGAAAGACATGGAGGAGTGCGGCTACGACAGACAAACCGGCTTCGTCTGGCTCAAACAAAAGAAGAGCTACACACACAAGTTCGAGAAAATTGGCAAACTTGTCTCCTACGCGCCCGAGGTCACTGCCCATGTCGAACATGGTAAAATTACCAAACTCACCGGTGTCAAGACCAAGGAGCTCTTGCTCTGGATCACGCTCAGTGATATCTATGTCGATGACCCTCCCACTGGCAAAATCACCTTCAAAACCCCTGCCGGGTTATTTAGGTCTTTTCCTGTTTCCGCCTTTGAGATTCAGGAGGAGGCTAAGGAGACCAAGCGCGTGGACGATACCGCTGAGGCTGTGCAAGTCAAGGAAGTCTGA 486 0.5021 MSLIAEDVKTRSEVYHGDEMCQVKSKELLKEIALPNGLLPLKDMEECGYDRQTGFVWLKQKKSYTHKFEKIGKLVSYAPEVTAHVEHGKITKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIQEEAKETKRVDDTAEAVQVKEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03585 161 Gene3D - 5 150 IPR036758 -
Pumo5g03585 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Pumo5g03585 161 PANTHER T31J12.3 PROTEIN-RELATED 21 140 IPR007493 -
Pumo5g03585 161 SUPERFAMILY At5g01610-like 5 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03585 Pumo-Chr5 85281988 85282866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03585 - - gmx:100306660 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03585 5 85281988 85282866 Pumo5g03585 5 85281988 85282866 ECH
Pumo5g03585 5 85281988 85282866 Pumo3g02050 3 32003403 32004371 PCT