Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02050 ATGTCTCTAGTGACTGCAGAGATCAAAGCCAAATCAGAGGTGTACCATGGAGATGAACTCTGCCAAGAAAAGTCCAAGTTACTGCTGAAGGAGGTGGGGTTACCCAATGGGCTTTTGCCCTTGAAGGACATTGAGGAATGTGGGTATGAGAAGGAGAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGAGCATAAACCACAAGTTTGAGAAGATTGGGAAGCTGGTGTCCTATGCTCCTGAGATCACTGCCTATGTTGAGGTTGGTAAGATAAAGAAGCTCACTGGTGTGAAGACCAAGGAGCTCTTGGTTTGGATCACACTCAATGAGATCTTTGTTGATGATCCACCCACTGGCAAGATCACTTGCAAGACCCCTTCAGGGCTCTTCAAGACATTCCCAGTCTCAGCCTTTGAGATTGAGGAGCCAGTTAAGGAAGTGAACAAGGAAGTTAAAAAAGTTGCTAGTGCTGCTAAAGTCCAAGAGGTTTGA 489 0.4622 MSLVTAEIKAKSEVYHGDELCQEKSKLLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKSINHKFEKIGKLVSYAPEITAYVEVGKIKKLTGVKTKELLVWITLNEIFVDDPPTGKITCKTPSGLFKTFPVSAFEIEEPVKEVNKEVKKVASAAKVQEV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02050 162 Gene3D - 5 149 IPR036758 -
Pumo3g02050 162 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Pumo3g02050 162 PANTHER T31J12.3 PROTEIN-RELATED 12 140 IPR007493 -
Pumo3g02050 162 SUPERFAMILY At5g01610-like 3 146 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02050 Pumo-Chr3 32003403 32004371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02050 - - gmx:100500427 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02050 3 32003403 32004371 Pumo3g02050 3 32003403 32004371 ECH
Pumo5g03585 5 85281988 85282866 Pumo3g02050 3 32003403 32004371 PCT