Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03571 ATGGCCAAGGAACCTTCTCTATGCCTCTTCTTCCTCTCTTTTCTCATCATCTACTCTTCAGGGACTGCATCTTCACCATCTGTTGGCACAACATTCCTTCAAAATAGCAAGATCTCCAAATCTGAGATTCGATTTTCTGTATCAGATTACAAGATTTTGAGCACTCTCACCAACACCAACCTGTCAGTTGATTTCTTCTTAAATGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCATCTCTAGTTTCATGGCTAGAAACTCATCTTACGAACATTCTTCCACAAGTAGACATCAGAAGCATCATTGTTAGATGTGGCACTGAGTGCTTAGGCCAAGATGAGATGCCTTTACTCATGCCTGTTCTGAAATCAATTCATTCATTTCTCAGCAATCTTCAGCTAAGAAGGGAAATGAAAGTCTCAGTGGCATTTCCACTTCCATTCTTAGAGAATTTGAATGCATCATATGAAAATGATCTCCTTAGGATTGCTATGTTTTTGAAGAAAATAGATTCATTTATCATGATAGAAGATATCATTGATGGGGAATTGAGCACTGTTCAGTCTGTTATTGAAAGAGCCACACTTGCTGCTTCTATTCTTCCTTGCAAAGATGTTCCTGTGGTTCTCACAATCAAGAGCCATGATATTCCCAGTTCAATGGAATTAGCTCAATTAAGTGAGGCAGTATCCAAATATCTTGAAGCAGGATCTCATTTTACAAAGAGAATAGTTGCATTGTATGCACAAGTACACACAACCAAAGATTTCGTACTGCTCAAAAGAAAAGAGATATTTCCTTTGTCCCTAAGAGAAAATCCAAGCAAAGTCCACATTAGAAGAACTCTACAAGACACAACCAACTCACCTACCACAGTTTTCCCCCCAAATCCAACCCCACCTTCACCAGTCATCACCACTCCAGATACACCAACAATCATCACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACCAATCCAGCTTCAACACCTGTGACAGTTCCTTCTACCACACCAGTTGTTCCCTTAGCCCCTACAAATCCAGCCAATCCAGGGGCACAACCAGTTACCAACCCTGTGACCTCTTATCCACCCCCATCAGGAAGTGTTCCTGTCACAAGTGCACTGCCTCCTCCTCCAAGCACAAATGCTCGAGCCATGCCAGGGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAATTCCAGAAGCTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGTCAAGTGTGGATTGTTCACAAATACAGCAAGGTGGGAGTTGTTACAATCCAAATTCATTACAAAACCATGCTTCTTTTGCCTTTAACAGCTACTACCAAAAGAATCCTGCGCCAACAAGCTGTGACTTTGGAGGGACTGCCACCATAGTTAACACCAATCCAAGCTCGGGTTCTTGCATTTACCCATCAACTTCAGGGGCAGGCACATCCGGCTCTGGTAGCCCACTTTCAGGGTCCCCAAGCCCTCCTGATTTAAATACCTCGTATTCAGCTGGTCTGAGACCTCTTCTTGGCTGCATGGTTGTGGTAATATCATTAGTCACTGTAAGACTCACTACATGA 1596 0.4298 MAKEPSLCLFFLSFLIIYSSGTASSPSVGTTFLQNSKISKSEIRFSVSDYKILSTLTNTNLSVDFFLNESLVENFVSSKSSLVSWLETHLTNILPQVDIRSIIVRCGTECLGQDEMPLLMPVLKSIHSFLSNLQLRREMKVSVAFPLPFLENLNASYENDLLRIAMFLKKIDSFIMIEDIIDGELSTVQSVIERATLAASILPCKDVPVVLTIKSHDIPSSMELAQLSEAVSKYLEAGSHFTKRIVALYAQVHTTKDFVLLKRKEIFPLSLRENPSKVHIRRTLQDTTNSPTTVFPPNPTPPSPVITTPDTPTIITVPSTNPVTVSPTNPASTPVTVPSTTPVVPLAPTNPANPGAQPVTNPVTSYPPPSGSVPVTSALPPPPSTNARAMPGGQSWCVAKTGIPEASLQSALDYACGMSSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPAPTSCDFGGTATIVNTNPSSGSCIYPSTSGAGTSGSGSPLSGSPSPPDLNTSYSAGLRPLLGCMVVVISLVTVRLTT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03571 531 FunFam Glucan endo-1,3-beta-glucosidase 4 391 483 - -
Pumo5g03571 531 Pfam X8 domain 396 466 IPR012946 -
Pumo5g03571 531 Gene3D - 390 485 - -
Pumo5g03571 531 SMART X8_cls 395 479 IPR012946 -
Pumo5g03571 531 Gene3D Glycosidases 18 179 - -
Pumo5g03571 531 PANTHER BETA-1,3 GLUCANASE 389 487 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03571 Pumo-Chr5 85143703 85147205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03571 41 481 Glycoside Hydrolase AT2G05790 25.934 1.47e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03571 - - gmx:100809473 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03571 5 85143703 85147205 Pumo5g03571 5 85143703 85147205 ECH
Pumo5g03571 5 85143703 85147205 Pumo3g02066 3 32187266 32190616 PCT