Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02066 ATGGCCAAGGAAGCTTCTCTGTGCCTCTTGTTTCTCCTCTCCTTTCTCACTATTTCTTGTTCTGGATCTCTGGTGGGTTTCTCCTACCGTGAGAGAGGAGACACTTCAACATCTGCTAGAACCATCTCATTCCTCCAGCAAAGTAAAGTTTCCTCTTCTCAGATTCGAATTTTTGTCACAGATCATAGGATTTTGAGCACTCTTAGCAACTGCAAAGTGCCAACTGATGTCTACTTGAACAAAAGTCAAGTTGAAAATTTCATCACTTCAAAACCCTCTGCTCTAAAAGCTCATCTACTGAACTTCCTTCCACATTTGAACATCAAAAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAATGAGATGCCATTGTTCTTACATGCTTTGAAATCAATTGGCTCAGTTCTCAGAGAGCTCCACTTAGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCATTCTTAGAAAAGTTGAATGCATCGCATGAAAACAGTATTCGTAGGATTCTTTCATTTATAAAGGAAATGAAATCCTTTGTCATGGTAGAAGACAGCATTCATGGAACATTAAGCACGGGGGATCACTTTGTTCATTCTATCATCAAACGAGCCACTCTTGCTGCTTCCATTCTTCCTTGGAAAGATGTTCCCATTGTTCTGACAATCAAAAGCACAGTTATCCCCTCTTCAATGGAATTAGCTCAATTTAGTGAGAGAGTATCTAAACATCTAGAATCCAAAGCCCATATTACTAAAAGAATAGCTGCATTATATGTAGAGGTGCATTCAACAGAAGATTTTGCTAGCAAAGAACACAAAAGGAGAAGTCTAGATGACACAACCAACCCAACAAACACAGTTTTCCCCACAAATCCAGCATCATCCACACCAATCATTACACCACCAGATACACCAACCATTATCACAGTTCCTGCCACAAATCCTGTCACAATTTCCCCTTCTAATCCTGCTGCAATGCCTGTAACAGTTCCTTCTAGCACACCTGTGCCTATACCTCCCACAAATCCAGCCAATTCACCAGTACCAGTGAGCAATCCAGCTACAACTACTCCTGTAGCGACACCGCCACCAGTAACCAACCCTGTCACATCTTATCCACCTCCATCAGGAAATGTTCCTGTCGTCAACCCGCAACCACAACCACCTCCTGCAACCACTAATGCTCCTGCCATTCAGGGGCAGAGTTGGTGTGTTGCAAAGCAAGGAGCTCCTGAAGCTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGGGTGGGGCAGATTGTTCTCAAATACAACAGGGTGCGAGTTGTTACAGTCCAGTTACTTTGCAGAACCATGCTTCTTTTGCCTTCAACAGCTACTATCAAAAGAATCCAGCTCCAACAAGCTGTGACTTTGGAGGGACTGCCACCTTAGTTAACACAAATCCAAGCTCGGGTTCATGCATTTTCCCATCATCATCATCATCATCAGCAACAACAACGCCAAAGTCATCACCCCCAACACCACCTACACAATCAAGTCCAACACTATCACCACCAAGTCCAGTAACACCTGCATCATCAATTCCAACAGCACCACCAACATCGACATCTTCAGGAACAGGCCCTTTCGGGTATGGTGCTCCACCTTCAGTATTAAACTCAAGCAACCCAGCGTCGGGTACAATGCCAGGTTTTGCGTCTGATAGCCCGCCTGTTGTAAATACCGCGTCAGCCTCACATTCTGTGGGTTTGAAACCTTTTGTTGGCTTCACTATTCTGATGGTATTGTTTGTCACTACGAGACTCAGTATGCACCCATAG 1824 0.4408 MAKEASLCLLFLLSFLTISCSGSLVGFSYRERGDTSTSARTISFLQQSKVSSSQIRIFVTDHRILSTLSNCKVPTDVYLNKSQVENFITSKPSALKAHLLNFLPHLNIKSIIASCGSECLAQNEMPLFLHALKSIGSVLRELHLGREVKISVAFPLSFLEKLNASHENSIRRILSFIKEMKSFVMVEDSIHGTLSTGDHFVHSIIKRATLAASILPWKDVPIVLTIKSTVIPSSMELAQFSERVSKHLESKAHITKRIAALYVEVHSTEDFASKEHKRRSLDDTTNPTNTVFPTNPASSTPIITPPDTPTIITVPATNPVTISPSNPAAMPVTVPSSTPVPIPPTNPANSPVPVSNPATTTPVATPPPVTNPVTSYPPPSGNVPVVNPQPQPPPATTNAPAIQGQSWCVAKQGAPEASLQSALDYACGMGGADCSQIQQGASCYSPVTLQNHASFAFNSYYQKNPAPTSCDFGGTATLVNTNPSSGSCIFPSSSSSSATTTPKSSPPTPPTQSSPTLSPPSPVTPASSIPTAPPTSTSSGTGPFGYGAPPSVLNSSNPASGTMPGFASDSPPVVNTASASHSVGLKPFVGFTILMVLFVTTRLSMHP 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02066 607 Gene3D - 401 504 - -
Pumo3g02066 607 SMART X8_cls 406 490 IPR012946 -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 274 303 - -
Pumo3g02066 607 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 342 367 - -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 503 529 - -
Pumo3g02066 607 PRINTS Proline rich extensin signature 354 371 - -
Pumo3g02066 607 PRINTS Proline rich extensin signature 372 397 - -
Pumo3g02066 607 PRINTS Proline rich extensin signature 284 296 - -
Pumo3g02066 607 PRINTS Proline rich extensin signature 337 353 - -
Pumo3g02066 607 PRINTS Proline rich extensin signature 315 336 - -
Pumo3g02066 607 FunFam Glucan endo-1,3-beta-glucosidase 1 25 188 - -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 489 564 - -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 284 298 - -
Pumo3g02066 607 PANTHER BETA-1,3 GLUCANASE 404 502 IPR044788 -
Pumo3g02066 607 Pfam X8 domain 407 477 IPR012946 -
Pumo3g02066 607 FunFam Glucan endo-1,3-beta-glucosidase 4 401 494 - -
Pumo3g02066 607 Gene3D Glycosidases 25 191 - -
Pumo3g02066 607 MobiDBLite consensus disorder prediction 530 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02066 Pumo-Chr3 32187266 32190616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02066 368 493 Glycoside Hydrolase AT2G05790 48.062 4.78e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02066 - - gmx:100794910 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02066 3 32187266 32190616 Pumo3g02066 3 32187266 32190616 ECH
Pumo5g03571 5 85143703 85147205 Pumo3g02066 3 32187266 32190616 PCT