Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03489 ATGGCTCCTGAGCTTGTCCCCACTGTTGCCAAATCCGGTGCTGGGTTCACGAAACCCGCGACCCTTCCAAGGCGTGCCTACGTGACATTCCTCGCTGGAAACGGTGACTACGTGAAAGGGGTGGTTGGCCTCGCCAAAGGGTTGCGAAAGGTGAAAACCGCTTACCCATTGGTGGTGGCTGTGCTTCCCGATGTGCCGGAGGAGCACCGTAAGATCCTGGAGTCTCAGGGCTGCATCGTCCGCGAGATCCAACCCGTTTACCCACCCGAAAACCAAACCCAGTTCGCTATGGCTTATTACGTCATCAACTACTCCAAACTCCGTATATGGGAGTTTGTGGAATACAGCAAAATGATATACTTGGACGGAGACATTGAGGTGTACGAGAACATAGACCAACTATTTGACCTGCCTGATGGTAACTTTTACGCTGTGATGGATTGTTTCTGCGAGAAGACCTGGAGTCACACCCTTCAGTACAAGGTGGGGTACTGCCAGCAATGCCCAGATAAGGTGCAGTGGCCCGCCGAATTGGGCCAGCCCCCTTCTCTTTACTTTAACGCTGGCATGTTCGTGTTCGAGCCCAGCATCGCCACCTACCATGACCTATTGAAAACGGTGCAAGTCACCACTCCCACCTCGTTCGCTGAACAGGACTTCTTGAACATGTACTTCAAGGACATTTACATGCCAATTCCTTTAAATTACAACCTTGTCCTCGCTATGCTGTGGCGCCACCCGGAGAATGTTAAGCTTGACGAAGTCAAGGTTGTTCACTACTGCGCAGCGGGATCGAAGCCGTGGAGATATACGGGGAAGGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTACAATGATGCTTCGCTTGACTACAAGCCAGCGGATGGTGTTGACATTGAGCCATTCGTACAGGCTCTATCAGAGGTTGGTAATGTTCAATATGTCACTGCGCCCTCAGCAGCGTAA 993 0.5126 MAPELVPTVAKSGAGFTKPATLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRKILESQGCIVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIEVYENIDQLFDLPDGNFYAVMDCFCEKTWSHTLQYKVGYCQQCPDKVQWPAELGQPPSLYFNAGMFVFEPSIATYHDLLKTVQVTTPTSFAEQDFLNMYFKDIYMPIPLNYNLVLAMLWRHPENVKLDEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDASLDYKPADGVDIEPFVQALSEVGNVQYVTAPSAA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03489 330 FunFam Hexosyltransferase 23 301 - -
Pumo5g03489 330 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Pumo5g03489 330 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 300 IPR029044 -
Pumo5g03489 330 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 296 - -
Pumo5g03489 330 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Pumo5g03489 330 CDD GT8_Glycogenin 25 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03489 Pumo-Chr5 84192881 84195048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03489 1 330 Glycosyltransferase AT1G56600 72.886 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03489 K18819 - gmx:100809287 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03489 5 84192881 84195048 Pumo5g03489 5 84192881 84195048 ECH
Pumo5g03489 5 84192881 84195048 Pumo3g02054 3 32043032 32044839 ECH