Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02054 ATGGCGATAATACCCTCCAAAGCTCTATATAAGCAACCACACCACTTCCCCGTCCATCACAACACCAAACCAAGATCTTCCTTACAAGTTTTCGAAGTGTCTTTTGTTTCCCAAATCCAACTCTTGTCAACCATGGCTCCTAATATCACAACTGTCAAATCCACCGACGCTGAAGCTAAGGCCGCCTACGTCACCTTCCTCGCCGGAAACGGTGACTATGTGAAAGGTGTCGTTGGGTTGGCCAAAGGCCTGAGGAAGGTGAAGAGCATGTACCCTCTGGTGGTTGCAGTGTTACCCGATGTTCCCGCAGAGCACCGCAACATTCTCACCTCCCAAGGTTGCATTGTTAGAGAAATTGAGCCCGTGTACCCCCCAGAGAATCAAACCCAGTTCGCCATGGCATATTACGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGATGGCGATATCCAAGTTTTTGACAACATTGACCACTTGTTTGACTTGCCTGATAATTACTTCTACGCGGTGATGGACTGTTTCTGCGAGCCCACTTGGTCCCACACTCCGCAGTTTCAGATCGGTTACTGCCAGCAGTGCCCTGATAAGGTTCAGTGGCCCACTCACTTTGGGCCCAAGCCTCCTCTCTATTTCAATGCTGGCATGTTTGTTTATGAGCCCAATCTTGCTACCTACCGTGACCTCCTTCAAACACTCCAAGTCACAAAGCCCACTTCCTTTGCTGAACAGGATTTTCTGAACATGTACTTCAAGGATAAATATAAGCCCATTCCTAATGTCTACAATCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTGAGCTTAACAAAGTGAAAGTGGTTCACTACTGTGCTGCTGGATCAAAGCCTTGGAGGTACACTGGGAAGGAGGAGAACATGGAGAGAGAAGATATCAAGATGTTAGTGAAGAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTATAACAATCCCCTCAATGTGGATAGGTTCACTGAGGCATTTATGGAGGTTGGTGAAGTCAAGTTCGTCCGCGCCCCTTCCGCCGCTTAG 1095 0.4767 MAIIPSKALYKQPHHFPVHHNTKPRSSLQVFEVSFVSQIQLLSTMAPNITTVKSTDAEAKAAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPAEHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDNYFYAVMDCFCEPTWSHTPQFQIGYCQQCPDKVQWPTHFGPKPPLYFNAGMFVYEPNLATYRDLLQTLQVTKPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELNKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYNNPLNVDRFTEAFMEVGEVKFVRAPSAA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02054 364 PANTHER GLYCOGENIN SUBFAMILY MEMBER 50 331 - -
Pumo3g02054 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 63 334 IPR029044 -
Pumo3g02054 364 CDD GT8_Glycogenin 62 331 - -
Pumo3g02054 364 FunFam Hexosyltransferase 59 337 - -
Pumo3g02054 364 Pfam Glycosyl transferase family 8 65 307 IPR002495 GO:0016757
Pumo3g02054 364 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 58 335 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02054 Pumo-Chr3 32043032 32044839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02054 45 364 Glycosyltransferase AT1G56600 74.627 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02054 K18819 - gmx:548050 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02054 3 32043032 32044839 Pumo3g02054 3 32043032 32044839 ECH
Pumo5g03489 5 84192881 84195048 Pumo3g02054 3 32043032 32044839 ECH