Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03460 ATGGCAACTATGAGTGGTGTGAGCCTTTCAAGCCCCAGGGTTTTGTTCAACACACCGCAAAACGCACATGCCGTAAAGTTCGCACTTCCACTGGGCCAAGGGGTGCGACCGGGTAGTATCAGGTTGGGTCGTGTGCTGAGGATCCGACCCGTTTGCGCTGCGCCGGATAAAATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGAAACGTGCGCCGACGACCCGAAGAGCGGGGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCCAGGGACAAGCAAAAGGAAACGGACTCCGACCCGCTTGAGAACTACTGCAAGGACAACCCGGAAACCATTGAGTGCAAAACTTTCGAAGACTGA 390 0.5821 MATMSGVSLSSPRVLFNTPQNAHAVKFALPLGQGVRPGSIRLGRVLRIRPVCAAPDKISEKVEESIKNAQETCADDPKSGECVAAWDEVEELSAAASHARDKQKETDSDPLENYCKDNPETIECKTFED 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03460 129 Pfam CP12 domain 58 128 - -
Pumo5g03460 129 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 4 129 IPR039314 -
Pumo5g03460 129 SMART CP12_2 58 129 IPR003823 -
Pumo5g03460 129 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03460 Pumo-Chr5 83860134 83861241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03460 - - gmx:100812168 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03460 5 83860134 83861241 Pumo3g02172 3 33463127 33463834 PCT