Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02172 ATGGCAACAATAGCTGGTAGTGGTGTGAGTCTTTCAAGTCCTAGCAGGGTATGTGCCAATGCCAAGGGATCAGACACAGCGCACAAGGCCCAGGCCGTGAGGTTCCCAGCGCTGTTCAGGCCCATTCAAAAGTGGCCCGGTTTGGTTGGGATGGCTCGGGCCCGGCCCGTTCGTGCGACGCCGGAGAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGGCGTGCTCGGGAGGCGGCGGTGACGCGGAATGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCGGCTGCGAGCCACGCCAGGGACAAGCAGAAGCAGTCCGACCCGCTCGAGAACTACTGCAAGGACAACCCAGAGACCGATGAGTGCCGCACCTATGATAACTGA 402 0.6169 MATIAGSGVSLSSPSRVCANAKGSDTAHKAQAVRFPALFRPIQKWPGLVGMARARPVRATPEKISEKVEESIKSAEEACSGGGGDAECAAAWDEVEELSAAASHARDKQKQSDPLENYCKDNPETDECRTYDN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02172 133 MobiDBLite consensus disorder prediction 1 20 - -
Pumo3g02172 133 Pfam CP12 domain 64 132 - -
Pumo3g02172 133 MobiDBLite consensus disorder prediction 100 133 - -
Pumo3g02172 133 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 8 133 IPR039314 -
Pumo3g02172 133 MobiDBLite consensus disorder prediction 1 30 - -
Pumo3g02172 133 SMART CP12_2 64 133 IPR003823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02172 Pumo-Chr3 33463127 33463834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02172 - - gmx:100814289 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03460 5 83860134 83861241 Pumo3g02172 3 33463127 33463834 PCT