Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03456 ATGGACTCGGACGAGACACCATTGGATGACAAAGCAAGAAGAACGAGAGATCTGTTAGCCAGTTTCTACTCTCCAATCCCTTCAGCATCTTCCAATCCCTTCTCCAAACACACCTCACCCGACGACATCAATTCCGCGTCGTTTCAACCTGATCAATACATGAATATCCTGGCGCGTAAGTCGAATTTGGAAGGTCTACTCCAGAGGCACGTTGAAATGGTAGCTGAAATAAAGAATCTAGACACTGACTTGCAAATGCTCGTCTACGAGAATTATAACAAGTTTATCTGCGCTACAGATACTATAAAGAGGATGAAGAGTAATATTTTGGGGATGGAGGACAATATGGAACAGCTTCTTGAGAAGATAATGTCTGTACAGTCAAGGAGTGTTGGTGTTAACACTTCTCTATGCGAAAATAGGGAGCATATAGAGAAAATGCATCGGACATGCAATCTTCTTCGTAAAATTCAGTTCATATATGATCTACCTGATAGACTAGGCAAGTGCATCAAGTCTGAGGACTATGCAGATGCAGTCAGGTTCTACACCGGTGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCAAGATTGTAAGCGAGCTTCTGAAGAAGCAATAGCTATCATAGTAAAAAACTTGCAGGCAAAGCTATTTTCAGATTCTGAATCAATGCAAGTGAGAGCCGAGGCTGCAGTGCTCTTGAAGCAGTTGAATTTTCCAGTGGACAATTTGAAGACAAAGCTACTAGAGAAGTTGGAGCTTTCCCTTGCAGACATTCAGTTTATCCCTGAAGTAATGGAGAATGCTTCTCCCTCTGGTCACGAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATCTATTTCTTCAAGAGCTCAAAATTACAGGCAATGAAGTGAAGCAGATTTTGCCTCAAGATATGCGAAAACACCGCAGGGCTGATAGTAATGGAAGCACTACTTCATCAAGAAGCAACTCTTTCCGTGAGGAGAAGTTGAGTCGCTCTAATAATATTCAGAAGGGAAGGAGCCAACAGCTTTTGGAAACACACTTAGCAAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAGTAGAAAATACACAGGAATCAGTCGTTATGACCATTGTTAAATTGTGCCTTAAAAGTTTACAAGAATTTGCTCGGCTCCAGACTTTTAACCGGAGTGGATTCCAGCAAATTCAGTTGGATATTCAGTTCTTGAGGACTCCATTGAAAGAAATTGTTGAAGATGAGGCTGCAATAGACTTCTTGCTTGATGAGGTGATTGTTGCTGCAGTAGAGCGATGCCTTGATCCAATTCCATTGGAGCCTCCGATATTGGACAAACTTATACAAGCAAAGCTTGCAAAACATAAGGAACAAGATATAATCTCTTCATAA 1416 0.4075 MDSDETPLDDKARRTRDLLASFYSPIPSASSNPFSKHTSPDDINSASFQPDQYMNILARKSNLEGLLQRHVEMVAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEDNMEQLLEKIMSVQSRSVGVNTSLCENREHIEKMHRTCNLLRKIQFIYDLPDRLGKCIKSEDYADAVRFYTGAMPIFKAYGDSSFQDCKRASEEAIAIIVKNLQAKLFSDSESMQVRAEAAVLLKQLNFPVDNLKTKLLEKLELSLADIQFIPEVMENASPSGHEHKEPREVHMFVDLFLQELKITGNEVKQILPQDMRKHRRADSNGSTTSSRSNSFREEKLSRSNNIQKGRSQQLLETHLAKLFKQKVEIFTKVENTQESVVMTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFLRTPLKEIVEDEAAIDFLLDEVIVAAVERCLDPIPLEPPILDKLIQAKLAKHKEQDIISS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03456 471 Pfam Vps51/Vps67 43 128 - -
Pumo5g03456 471 MobiDBLite consensus disorder prediction 24 45 - -
Pumo5g03456 471 MobiDBLite consensus disorder prediction 307 343 - -
Pumo5g03456 471 Coils Coil 102 129 - -
Pumo5g03456 471 PANTHER UNCHARACTERIZED 6 263 IPR014812 -
Pumo5g03456 471 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03456 Pumo-Chr5 83828112 83836143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03456 K20296 - vum:124845764 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03456 5 83828112 83836143 Pumo5g03456 5 83828112 83836143 ECH
Pumo5g03456 5 83828112 83836143 Pumo3g02178 3 33517825 33526164 PCT