Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02178 ATGGTGGCAGATGAAGTAGTAGCAGTACCAATGGACGACAAAGCAAAGAGGATGCGAGATCTGCTATCGAGTTTCTACTCCCCAGACCCTTCCATCTCCAACACCACCTCCAAACATGCTTCCCTCGACGACATCAATTCCACCTCCTTCGATCCCGATCAGTACATGAATATCCTCGCACACAAGTCCAATTTGGAAGGCCTGCTCCAACGCCACGTTGAAATGGCAGCTGAAATCAAGAATCTCGACACCGACTTGCAAATGCTAGTTTACGAGAATTACAACAAGTTCATTAGCGCCACAGACACTATAAAGAGGATGAAAAGCAACATTTCAGGGATGGAGGCGAATATGGAGCAGCTTCTTGAGAAGATAATGTCTGTGCAGTCGAGAAGTGACAGTGTCAACACTTCTCTATTTGACAAAAGGGAGCATATTGAGAAACTGCATCGGACTTGTAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCTGATAGACTAGGCAAGTGCATCAAGTCGGAGGCCTATGCAGATGCAGTCAGGTTTTACACTGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCGGGATTGTAAGCAAGCATCTGAAGAAGCAATAGCTATCATAGTAAAAAACTTACAGGGGAAGCTATTTTCAGATTCCGAATCAATACAAGTGAGAGCTGATGCAGCAGTGCTTCTTAAGCAGTTGGATTTTCCGGTGAACAATTTGAAGGTGAAGTTATTTGAAAAGTTAGAACAATCTGTTGCAGACATTCAACTGAACCCTGAAGAAATAAAAAATGCTTCAGGGGACCGTTCTGCTCATGAGTACATAAATATGAGAACTCAGAGGGTATCACTTCTCCTGAAGAAGAGGTTTACCACCCCTAATTGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGTTATAGTTAACGAAGTGAAGCAGATTTTGCCTAAAGGTAGACGTAAGCACCACAGGACTGATAGTAATGGAAGTAGTGCTTCATCAAGGAGCAACCCCTTACGGGAGGAGAAACTGGGTAGGTCAAATACTCAAAGGGCAAGGAGCCAGCTTTTGGAAACGCATCTAGCAAAATTGTTTAAGCAGAAAGTTGAAATTTTCACAAAAGTAGAATATACACAGGAGTCTGTTGTTACAACTATAGTTAAATTGTGCCTTAAAAGTTTACAAGAATTTGTCCGGCTCGAGACTTTTAACCGAAGTGGATTCCAGCAAATTCAATTGGATATCCAGTTCCTAAGGATCCCATTAAGGGAAATAGTTGAAGATGAAGCTGCAATCGACTTCTTGCTAGATGAGGTGATTGTTGCTACTGCAGAACGGTGTCTAGATCCGATTCCGTTGGAGCCTCCCATATTGGACAAACTTATACGAGCAAAGTTGGCTAAAACCGAGGAGCAAAATACAATTTCTTCATAA 1494 0.417 MVADEVVAVPMDDKAKRMRDLLSSFYSPDPSISNTTSKHASLDDINSTSFDPDQYMNILAHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMEANMEQLLEKIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFRDCKQASEEAIAIIVKNLQGKLFSDSESIQVRADAAVLLKQLDFPVNNLKVKLFEKLEQSVADIQLNPEEIKNASGDRSAHEYINMRTQRVSLLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEVIVNEVKQILPKGRRKHHRTDSNGSSASSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFVRLETFNRSGFQQIQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIRAKLAKTEEQNTISS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02178 497 Coils Coil 104 131 - -
Pumo3g02178 497 MobiDBLite consensus disorder prediction 337 371 - -
Pumo3g02178 497 PANTHER UNCHARACTERIZED 10 268 IPR014812 -
Pumo3g02178 497 Pfam Vps51/Vps67 45 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02178 Pumo-Chr3 33517825 33526164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02178 K20296 - gmx:100818891 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02178 3 33517825 33526164 Pumo3g02178 3 33517825 33526164 ECH
Pumo5g03456 5 83828112 83836143 Pumo3g02178 3 33517825 33526164 PCT