Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03446 ATGGCGGTCACTACTCAGTCTCTTTCTGCCACAGAAAAGAAACACTGGTGGCTTACCAACCGAAAGATTGTTGAGAAATACATTAAAGACGCTCGGAGTCTTATAGCGACGCAAGATCAGAGCGAGATTGCTTCGGCTCTGAACCTTGTAGATGCGGCGCTGGCGATTTCTCCGAGGTTTGACCAAGCGCTTGAGCTCAGGGCGAGGGCGTTGCTCTATTTGCGGCGTTTCAAAGACGTTGCTAATATGCTTCAGGACTACATTCCGAGCCTGAGAATGGGAAATGATGACTCATCATCTTCCTCAGTTTCTTCTGACTCCTCTTCTCAGCAACTTTCGAGGGAGGGAGTGAAGCTTCTCTCTTCCTCGGAATCTCCGGTGCGGGATCAGAGTTTCAAGTGCTTCTCTGTGTCTGACCTCAAGAAGAAGGTCATGGCGGGGCTGTGTAAAACTTGCGACAAAGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGAAAACGCCTTGCCAGCGCGGCATTCCGGCGCGAGAGTGTGTGTTGGTCGGAAGACAGCTTTTGTGTAACTAACATTCCGTTCTCCGGCGACGCCACAAACGCGCCACCCACAACTCCGCCGCGAACCCTTCTCTCGGACTCCGAGAGCGTGTCCCAACTCCTCGGCCACATCAAGTTCCTCCTCCGGCGGCGCGCCGCCGCGCTGGCCGCACTCGACGCCGGGCTCTACTCGGAGGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGGAGCGCGCCGCAGAGCTTCCTGGCCGAATGCTACATGCACCGCGCCTCCGCGCACCGTTCCGCCGGCCGAATCGCGGAGTCAATCGCCGATTGCAACCGCACCCTCGCGTTGGACCCCACTTGCATTCAAGCCCTCGAAACCCGAGCCTCGCTCTTCGAAACAATTCGCTGTTTACCTGACTCTCTTCACGACCTCGAACACTTGAAGCTTCTCTACAACTCAATCTTGCGCGATCGCAAGCTTCCCGGTCCTGCGTGGAAGCGCCACAACGTGCGATACAGGGAAATTCCAGGGAAACTCTGTGCCCTAACTATTAAAATTCAGGAACTGAAGCAGAGGTTGGCTTCTGGTGAAACCGGGAATGTTGATTACTATGCTTTGATTGGTGTCCGACGAGGTTGTTCCCGGTCGGAGTTGGAGAGGGCCCACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGGCAACGGGTTTCATTGAAAGGTGCGAGCTTGCGGATGAGCGTGATGTTGAGTCCGTTAAAGAGAGGGCCAAGATGTCGTCATTGTTGTTATATAGATTGGTTCAAAAGGGTTACACTAATGTGATGGGTAACATCATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCTGCTTTGCAAGCTATTCAAGCACAGAAAGAGAAAACCAATGAAGCTGAGTTCAGTAAGGTTGAGAGTAAAAGGAGCAGCGTGGAGAATAATAATAGTACTCAAAATAAGTCTATGGTGTCTTCTTCTACTGTGAATCCGGCGGTGTTTCAGGGTGTTTTCTGCCGTGACCTTGCGGTGGTGGGGAACTTGCTTTCTCAGGTGGGGTTTAACCGGTCCATGCCGGTGAAGTATGAAGCGTTGAGCTGTTGA 1707 0.5284 MAVTTQSLSATEKKHWWLTNRKIVEKYIKDARSLIATQDQSEIASALNLVDAALAISPRFDQALELRARALLYLRRFKDVANMLQDYIPSLRMGNDDSSSSSVSSDSSSQQLSREGVKLLSSSESPVRDQSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSEDSFCVTNIPFSGDATNAPPTTPPRTLLSDSESVSQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTIKIQELKQRLASGETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVKERAKMSSLLLYRLVQKGYTNVMGNIMDEEAAEKQRKKAALQAIQAQKEKTNEAEFSKVESKRSSVENNNSTQNKSMVSSSTVNPAVFQGVFCRDLAVVGNLLSQVGFNRSMPVKYEALSC 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03446 568 MobiDBLite consensus disorder prediction 499 526 - -
Pumo5g03446 568 Coils Coil 474 501 - -
Pumo5g03446 568 Gene3D Tetratricopeptide repeat domain 213 355 IPR011990 GO:0005515
Pumo5g03446 568 SMART tpr_5 282 315 IPR019734 GO:0005515
Pumo5g03446 568 MobiDBLite consensus disorder prediction 510 526 - -
Pumo5g03446 568 Gene3D DnaJ domain 383 530 IPR036869 -
Pumo5g03446 568 PANTHER OS01G0273500 PROTEIN 5 568 - -
Pumo5g03446 568 CDD DnaJ 397 431 IPR001623 -
Pumo5g03446 568 SUPERFAMILY Chaperone J-domain 393 431 IPR036869 -
Pumo5g03446 568 SUPERFAMILY TPR-like 248 343 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03446 Pumo-Chr5 83741672 83744901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03446 - - gmx:100808420 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03446 5 83741672 83744901 Pumo5g03446 5 83741672 83744901 ECH
Pumo5g03446 5 83741672 83744901 Pumo3g02186 3 33640094 33643403 PCT