Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02186 ATGGCTGTGACCACTCCCTGTCTCAATGCCACAGAAAAGAAGCACTGGTGGCTCACCAACCGAAAGATTGTTGAGAAATACATCAAGGACGCTCGGAGTCTGATAGCGACGCAGGAACAGAGCGAGATCGCTTCGGCGCTGAACCTTCTAGACGCGGCTCTCGTGATCTATCCGCGGCTGGACGAAGCGCTCGAGCTGCGAGCGAGGTCTCTGCTCTATCTGCGAAGGTTCAAAGACGTAGCGGATATGCTTCATGACTACATTCCGAGCCTGAAAATGGCGAACGATGACTCCGCCTCTGTCTCTTCGGATGGTTCGTCTCAACAGCTTTCGAGGGAAGGTGTGAAGCTTCTCTCGGATTCCTCTTCCTCGGGTTCGGATCAGAGTTTCAAGTGCTTCTCCGTCTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAACTTGCGACAAGGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGCTGCCACCTTGGCCTAATGGAAGACGCAATGGTCCTCCTCCAAACCGGTAAACGTTTAGCCACCGCCGCCTTCCGTCGCGAGAGCGTGTGTTGGTCCGACGACAGCTTCTCCCTCTCCAACCCCCTCTTCTCCGGCGACACCCCACCCCGCGCCCCACTCCCGGAGTCCGAAGCCGTGACCCAACTCCTCGCCCACATAAAGCTCCTCCTCCGGCGCCGCGCCGCCGCCCTCGCCGCCCTGGACGCGGGCCTCCACTCGGAAGCCATCCGCCACTTCTCGAAAATCGTCGACGGCCGCCGCGGCGCCCCGCAGGGCTTCCTCGCGGAGTGCTACATGCATCGAGCCTCCGCGCACCGCTCCGCCGGCCGAATCGCCGACTCAATCGCGGACTGCAACAGAACCCTGGCCCTGGACCCCACCTGCATCCAAGCCCTCGAAACCCGAGCCTCCCTCCTCGAATCCCTTCGGTGCTTCCCGGACTCCCTCCACGACCTCGAACACCTCAAGCTCCTCTACAACACCATCCTCCGTGACCGCAAGCTCGCGGGCCCCACCTGGAAGCGCCACAACGTCCGCTACAGAGAAATCCCCGGGAAACTCTGCGCCCTCACCGTAAGAATCCAGGAACTCAAGCAGAGGATGGCTTCCGGGAACAGCGTGGACTACCACGCGCTCATCGGGTTGCGGCGCGGCTGCGGCCGTTCGGAGCTGCAGAGGGCGCATTTGCTGCTGTCCCTGAAACACAAGCCCGACAAGGCCACGTGCTTCATTGAACGTTGCGAGCTCGCTGACGAGCGCGACCTCGATTCCGTTAAGGAGAGGGCGAGGATGTCGGCGCTGTTGCTCTACAGGCTGCTCCAGAAGGGTTACACCAACGTGATGGGGACCATCATGGACGAGGAGAATGCTGAGAAGCAGAGGAAGAAGGTTCTGGAAGCTCAAGTGATTAGTAATAATAATGAGAAATTGGTGGAGAACAATAACAAGTGCACCGTTTCGTCTCCTTCGACCGCGAACCCCTCTGTTTATCAGGGGGTGTTTTGCCGCGACATTGCGGTGGTTGGGAACTTGCTCTCGCAAACGGGGTTCAACCGCTCCATTCCGGTGAAGTACGAGGCGTTGAGCTGCTGA 1626 0.5892 MAVTTPCLNATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIASALNLLDAALVIYPRLDEALELRARSLLYLRRFKDVADMLHDYIPSLKMANDDSASVSSDGSSQQLSREGVKLLSDSSSSGSDQSFKCFSVSDLKKKVMAGLCKTCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLATAAFRRESVCWSDDSFSLSNPLFSGDTPPRAPLPESEAVTQLLAHIKLLLRRRAAALAALDAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAHRSAGRIADSIADCNRTLALDPTCIQALETRASLLESLRCFPDSLHDLEHLKLLYNTILRDRKLAGPTWKRHNVRYREIPGKLCALTVRIQELKQRMASGNSVDYHALIGLRRGCGRSELQRAHLLLSLKHKPDKATCFIERCELADERDLDSVKERARMSALLLYRLLQKGYTNVMGTIMDEENAEKQRKKVLEAQVISNNNEKLVENNNKCTVSSPSTANPSVYQGVFCRDIAVVGNLLSQTGFNRSIPVKYEALSC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02186 541 PANTHER OS01G0273500 PROTEIN 4 541 - -
Pumo3g02186 541 SUPERFAMILY TPR-like 239 334 IPR011990 GO:0005515
Pumo3g02186 541 SMART tpr_5 273 306 IPR019734 GO:0005515
Pumo3g02186 541 Gene3D Tetratricopeptide repeat domain 25 494 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02186 Pumo-Chr3 33640094 33643403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02186 - - gmx:106797171 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02186 3 33640094 33643403 Pumo3g02186 3 33640094 33643403 ECH
Pumo5g03446 5 83741672 83744901 Pumo3g02186 3 33640094 33643403 PCT