Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g03445 ATGGATGCTCTGTGTTTACACAGTAGCATTTGTGGGATAGCTCCTTCCATTCCCATTACTGCAACTGCACGCGCCAATGATTACGCCTCACACTCTCAGGTCAGCGCCTCCTTGTTTTCCAGATTCTCTTTTAGATACCCTTTGATGTCTTTTTGGCCACGACCAACCGGGAATGCCTCCGGCTACAACGGTCTCGCCCTCGACGACGCCGTTTTGGCAGAGAATGCAACGCCCGAGACAGAACAACGAGAACGAGAAGAAGAAGAAGAAGAAGGAGAGGGACAAAATGGGAACTGGGTTTTTAAGATTTTTCATACAAGGCCTCTTTGGAGAGGGGAACAGAAGAGCGATGAAGAGGAAACTGTGGCCAATGATCAAACGGATGAAGAGTGCGATGGTTGCAGGGTTGATTATGATGATGATGAAGAAAAAGAAGAGGTTTCTTTCGATAGAGACTCGTTTTCGAGAATGCTTCGGAGGGTGTCATTGCCCGAAGCTAAATTATATGCGCGCATATCCCACTTGGGCAATTTGGCATACTCTATTCCCAAAATCAAACCAGGGAAACTCTTCAAACACTATGGTCTGCGTTTTGTAACTTCATCCATAGAGAAGAAGAAATTAGCTGTGGCAGCTGAAAAAAATCAGACAACATCTGCTGCAACTCAGAAAGAAGAAACTAATGAGAAGGATGTGGGAGAAACAAAAGAGGAAAAGAATGGTGGATACATGATGAGTGCATCTGCTGCATACGAGATGGCTGCTTCTGCTGCCTCTTATCTCCATGCTCAGACAAGGAGCATACTTCCATTCAAATCTTCTGATGCTGTGGAAGGTGAAGGTTCACTTGAAGCAAGCAATGAAAGCTTTAATGGTGATAAGATGACAAACACGGAGGAGGCAGCTTTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGCAAGTAAAGCAGGCTTTTGCAGATGATTTGAACTCAACAAGCTCTTCACCCTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGGGCTCCGAGTCGTTCGCATCCTGGCAAGCAAACCTACTATTTGAGCCAGTTCAATTTGAGGGGTTAGATGTGCATGTACATAGAGGTATATACGAGGCTGCAAAAGGGACATATCAACAGATGCTGCCAGAAATTCGTGCTCACCTAAACTCTCATGGTTCTCGTGCAACTTTCCGTTTCACTGGTCATTCTCTTGGGGGGAGCTTGGCATTACTTGTAAATCTTATGCTATTGATAAGGAAGGAAGCACCACTCTCCTCTTTGCTTCCTGTCATAACCTTTGGTGCCCCATCCATTATGTGTGGAGGTGACACTCTACTTGACAAGCTAGGATTGCCACGCAGTCATGTTCAGGCAATCACAATGCACAGAGATATAGTACCTCGAGCATTTTCTTGCCAGTACCCTAACCATGTTGCAGAACTACTAAAGGCTGTTAATGGTAACTTCCGCAAACATCCTTGCCTTAATAACCAGAAGCTATTATATGCACCAATGGGAGAACTGCTAATTCTACAGCCAGATGAGAAATTTTCACCAAGTCATCATCTGCTTCCCTCAGGCAGTGGTCTATATCTTTTGAGTGGTTGTTTGTCAGAACCTAGTGACAAATTAAAACAGATCCACGCAGCTCAATTGGTTTTCTTGAACACACCACATCCACTTGAGATACTAAGTGACCGATCTGCTTATGGATCTGGAGGAACCATTCAGAGAGATCATGACATGAATTCCTACTTAAGATGTGTGAGAACCGTGATTCGGCAAGAACTTAACCAGATTCGTAAGGCAAGGAGAGAGCAAAGGCGAAATGCGTGGTGGCCTCTCGTGCTGCCACGTGGAAGTGACACTGACATAGTTGTTGGTGGGGGGTCCATGATATCGGTCAACATGATTCAAGACCAGCCTTCCTTCTCTGGAATCATTCACACGGATCAAATTTCAAGTTCGGTTGAGCAACCAAAAGAATTAAAGCCATTTGCCCCTATGTTGGTCACTGGATCGATAAATGGTGACGGTCTAGGCCCTGTTTCTTGGTGGTTTGGAGAAGAGGATGAGGACGAGTGA 2130 0.4507 MDALCLHSSICGIAPSIPITATARANDYASHSQVSASLFSRFSFRYPLMSFWPRPTGNASGYNGLALDDAVLAENATPETEQREREEEEEEGEGQNGNWVFKIFHTRPLWRGEQKSDEEETVANDQTDEECDGCRVDYDDDEEKEEVSFDRDSFSRMLRRVSLPEAKLYARISHLGNLAYSIPKIKPGKLFKHYGLRFVTSSIEKKKLAVAAEKNQTTSAATQKEETNEKDVGETKEEKNGGYMMSASAAYEMAASAASYLHAQTRSILPFKSSDAVEGEGSLEASNESFNGDKMTNTEEAALKATTDSVTAVVAANEQVKQAFADDLNSTSSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPVQFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLNSHGSRATFRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDTLLDKLGLPRSHVQAITMHRDIVPRAFSCQYPNHVAELLKAVNGNFRKHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGCLSEPSDKLKQIHAAQLVFLNTPHPLEILSDRSAYGSGGTIQRDHDMNSYLRCVRTVIRQELNQIRKARREQRRNAWWPLVLPRGSDTDIVVGGGSMISVNMIQDQPSFSGIIHTDQISSSVEQPKELKPFAPMLVTGSINGDGLGPVSWWFGEEDEDE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g03445 709 CDD Lipase_3 305 483 - -
Pumo5g03445 709 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 25 647 IPR043367 GO:0008970
Pumo5g03445 709 MobiDBLite consensus disorder prediction 224 238 - -
Pumo5g03445 709 SUPERFAMILY alpha/beta-Hydrolases 332 518 IPR029058 -
Pumo5g03445 709 MobiDBLite consensus disorder prediction 213 241 - -
Pumo5g03445 709 MobiDBLite consensus disorder prediction 112 139 - -
Pumo5g03445 709 MobiDBLite consensus disorder prediction 76 97 - -
Pumo5g03445 709 Pfam Lipase (class 3) 351 488 IPR002921 GO:0006629
Pumo5g03445 709 MobiDBLite consensus disorder prediction 122 139 - -
Pumo5g03445 709 Gene3D alpha/beta hydrolase 291 515 IPR029058 -
Pumo5g03445 709 Gene3D - 616 701 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g03445 Pumo-Chr5 83717980 83725255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g03445 1 669 Acyl Lipid Metabolism Gene Families AT1G02660 54.806 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g03445 - - gmx:100817848 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03445 5 83717980 83725255 Pumo5g03445 5 83717980 83725255 ECH
Pumo5g03445 5 83717980 83725255 Pumo3g02190 3 33681023 33682051 PCT