Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02190 ATGTTGCCAGAAGTATATGCTCACCTAAAATCTCGAGGTTCTCGTGCAACTTTTCGTTTCACTGGGCATTCTCTTGGTGGAAGCTTGGCATTACTTGTGAATCTCATGCTGTTGATAAGGCAAGAAGTGCCTATCTCCTCTCTACTTCCTGTGATAACATTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAGAAAAGTTAGGTTTGCCAAGGAGTCATGTTCAAGCAATTACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAACTACCCTAACCATGTCGCAGAACTATTGAAGGCTGTCAATGGGAACTTCCGTAGTCATCCTTGTCTCAATAAACAGAAGCTACTATATGCACCAATGGGTAATCTGCTGATTCTGCAGCCAGATGCGAAATTTTCACCAGGCCATCATCTCCTGCCATCAGGCAGTGGTCTATATCATTTGTGTTGTCCTTTATCAGAATCCAATGACACAGAGAAGCAGCTCCGAGCTGCTCAGATGGTCTTCTTGAACTCACCTCATCCACTTGAGATACTAAGTGACCGATCTGCTTATGGATCTGGAGGAAGTATACAAAGAGATCATGACATGAATTCCTACTTGAAGTCTGTGAGAACTGTGATTCGCCAAGAACTTAACCAGATCCGTAAAGCTAAGAGAGAGCAACGGCGCAAGGTGTGGTGGCCTCTTGTGTTACCACGTGGAATTGATACCAGCATTGTTGCTGGGAGGTCCATGATATCAGTCAATGTGGGTCAACGCCAGTCACCCTTCTCTGGCATGATACAAACAGGGAGAGAGTCCCTGAAAAGGTTCAGTAGGCTTGTGACATCGCAACATATGCATTTGTTTGTGTTGCTTTTGTTCCCTGTTCGGTTGTTACTGTTGGGAACATATAGCGTAATTAACCTCAAATGA 936 0.4455 MLPEVYAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGSPSIMCGGDSLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRSHPCLNKQKLLYAPMGNLLILQPDAKFSPGHHLLPSGSGLYHLCCPLSESNDTEKQLRAAQMVFLNSPHPLEILSDRSAYGSGGSIQRDHDMNSYLKSVRTVIRQELNQIRKAKREQRRKVWWPLVLPRGIDTSIVAGRSMISVNVGQRQSPFSGMIQTGRESLKRFSRLVTSQHMHLFVLLLFPVRLLLLGTYSVINLK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02190 311 Pfam Lipase (class 3) 9 94 IPR002921 GO:0006629
Pumo3g02190 311 SUPERFAMILY alpha/beta-Hydrolases 6 132 IPR029058 -
Pumo3g02190 311 Coils Coil 207 227 - -
Pumo3g02190 311 Gene3D alpha/beta hydrolase 1 235 IPR029058 -
Pumo3g02190 311 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 300 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02190 Pumo-Chr3 33681023 33682051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02190 1 311 Acyl Lipid Metabolism Gene Families AT1G02660 69.620 5.06e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02190 - - gmx:100807834 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02190 3 33681023 33682051 Pumo3g02190 3 33681023 33682051 ECH
Pumo5g03445 5 83717980 83725255 Pumo3g02190 3 33681023 33682051 PCT